RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 BLIDQ8IZY5 108 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 FBXO18Q8NFZ0 1043 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 MORC4Q8TE76 937 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 MAML3Q96JK9 1138 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 AIFM3Q96NN9 605 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 PTPN22Q9Y2R2 807 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 RPTORQ8N122 1335 aa11.74□□□□□ -0.53
HTT-204ENST00000508321 PGK2P07205 417 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 CYP2B6P20813 491 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 EDNRBP24530 442 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 CAP1Q01518 475 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 ARHGEF16Q5VV41 709 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 KRT40Q6A162 431 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 KRT25Q7Z3Z0 450 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 FGD4Q96M96 766 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 RMDN3Q96TC7 470 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 TINF2Q9BSI4 451 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 ANO3Q9BYT9 981 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 PXMP2Q9NR77 195 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
HTT-204ENST00000508321 MYH15Q9Y2K3 1946 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 FRMPD3Q5JV73 1810 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 H3BQV1 296 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 M0R2N6 131 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 ADCY3O60266 1144 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 IGHA2P01877 340 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 HOXA13P31271 388 aaPredicted RBP11.72□□□□□ -0.53
HTT-204ENST00000508321 SREBF1P36956 1147 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 NPY5RQ15761 445 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 USP17L6PQ6QN14 398 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 ARMCX2Q7L311 632 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 NPLOC4Q8TAT6 608 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 TRIB2Q92519 343 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 SHISA4Q96DD7 197 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 NAP1L4Q99733 375 aaKnown RBP11.72□□□□□ -0.53
HTT-204ENST00000508321 PDCD2LQ9BRP1 358 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 FOXP1Q9H334 677 aaPredicted RBP11.72□□□□□ -0.53
HTT-204ENST00000508321 VTA1Q9NP79 307 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 COL20A1Q9P218 1284 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 CNPY2Q9Y2B0 182 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 PTCH2Q9Y6C5 1203 aa11.72□□□□□ -0.53
HTT-204ENST00000508321 ASTN1O14525 1302 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 CCDC194A0A1B0GVG4 234 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 CCND2P30279 289 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 GRK4P32298 578 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 RGS19P49795 217 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 CNTN2Q02246 1040 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 PDE4DQ08499 809 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 PGM5Q15124 567 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 NONOQ15233 471 aaKnown RBP eCLIP11.71□□□□□ -0.53
HTT-204ENST00000508321 UBE2SQ16763 222 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 GNPTABQ3T906 1256 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 PCNX4Q63HM2 1172 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
HTT-204ENST00000508321 FCHSD1Q86WN1 690 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 DIS3L2Q8IYB7 885 aaKnown RBP11.71□□□□□ -0.53
HTT-204ENST00000508321 ABHD16BQ9H3Z7 469 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
HTT-204ENST00000508321 PCDHA6Q9UN73 950 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 KCNJ14Q9UNX9 436 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 PCDHA8Q9Y5H6 950 aa11.71□□□□□ -0.53
HTT-204ENST00000508321 HTTP42858 3142 aa11.71□□□□□ -0.54
HTT-204ENST00000508321 PDE4DIPQ5VU43 2346 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 ECM2O94769 699 aaPredicted RBP11.7□□□□□ -0.54
HTT-204ENST00000508321 NR3C2P08235 984 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 EIF2AK2P19525 551 aaKnown RBP11.7□□□□□ -0.54
HTT-204ENST00000508321 UBXN2AP68543 259 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 SETQ01105 290 aaPredicted RBP11.7□□□□□ -0.54
HTT-204ENST00000508321 GNL2Q13823 731 aaKnown RBP11.7□□□□□ -0.54
HTT-204ENST00000508321 STXBP2Q15833 593 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 SLC9C1Q4G0N8 1177 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 MAP3K21Q5TCX8 1036 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 KCNV1Q6PIU1 500 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 MOXD1Q6UVY6 613 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 TBC1D5Q92609 795 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 TNFRSF25Q93038 417 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 TAAR1Q96RJ0 339 aa11.7□□□□□ -0.54
HTT-204ENST00000508321 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.7□□□□□ -0.54
HTT-204ENST00000508321 BIN2Q9UBW5 565 aaPredicted RBP11.7□□□□□ -0.54
HTT-204ENST00000508321 MSCO60682 206 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 EIF3JO75822 258 aaKnown RBP11.69□□□□□ -0.54
HTT-204ENST00000508321 CYP3A4P08684 503 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 GCFC2P16383 781 aaKnown RBP11.69□□□□□ -0.54
HTT-204ENST00000508321 U2AF2P26368 475 aaKnown RBP eCLIP11.69□□□□□ -0.54
HTT-204ENST00000508321 TRAPPC10P48553 1259 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 USP11P51784 963 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 ARHGAP4P98171 946 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 ORC2Q13416 577 aaPredicted RBP11.69□□□□□ -0.54
HTT-204ENST00000508321 JAKMIP3Q5VZ66 844 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 NIPA1Q7RTP0 329 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 BRAPQ7Z569 592 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 VSIG10LQ86VR7 867 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 CRYGNQ8WXF5 182 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 ARMC5Q96C12 935 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 CDHR1Q96JP9 859 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
HTT-204ENST00000508321 STX6O43752 255 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms