RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 NKRFO15226 690 aaKnown RBP eCLIP15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 ARIH2O95376 493 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 CYP21A2P08686 494 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 ACRP10323 421 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 CPT1AP50416 773 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 PTH1RQ03431 593 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 PSRC1Q6PGN9 363 aaPredicted RBP15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 SYTL5Q8TDW5 730 aaPredicted RBP15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 COPS5Q92905 334 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 POLR3EQ9NVU0 708 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 TAF6LQ9Y6J9 622 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 GBF1Q92538 1859 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 TANC1Q9C0D5 1861 aa15.18■□□□□ 0.02
HMGCS1-205ENST00000508319 CHD7Q9P2D1 2997 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 A6NJR5 290 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 B4DLN1 442 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 OPLAHO14841 1288 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 DHX16O60231 1041 aaKnown RBP15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 DNAJB2P25686 324 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 MRPL12P52815 198 aaKnown RBP15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 ZNF365Q70YC5 407 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 FBXO11Q86XK2 927 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 MTMR8Q96EF0 704 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 TAAR1Q96RJ0 339 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 WNT8AQ9H1J5 351 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 IL23AQ9NPF7 189 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 MAD2L2Q9UI95 211 aa15.17■□□□□ 0.02
HMGCS1-205ENST00000508319 SPTBN5Q9NRC6 3674 aaKnown RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 SGSM2O43147 1006 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 PPP1R11O60927 126 aaPredicted RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 MYL3P08590 195 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 TTLL4Q14679 1199 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 SLC35G1Q2M3R5 365 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 STOX1Q6ZVD7 989 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 MCF2L2Q86YR7 1114 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 MYLIPQ8WY64 445 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 MTG1Q9BT17 334 aaPredicted RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 VAT1LQ9HCJ6 419 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 MRPL11Q9Y3B7 192 aaKnown RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 U3KPZ7 1027 aaPredicted RBP15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
HMGCS1-205ENST00000508319 PALM3A6NDB9 673 aaPredicted RBP15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 KLRF2D3W0D1 207 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 DLL1O00548 723 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 HSD17B4P51659 736 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 CCL23P55773 120 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 GHRHRQ02643 423 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 TRDNQ13061 729 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 CCDC62Q6P9F0 684 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 NSUN6Q8TEA1 469 aaKnown RBP15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 HERVK_113Q902F9 699 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 VWCEQ96DN2 955 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 RMDN3Q96TC7 470 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 AMNQ9BXJ7 453 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 SENP2Q9HC62 589 aa15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 CXXC1Q9P0U4 656 aaPredicted RBP15.15■□□□□ 0.02
HMGCS1-205ENST00000508319 GRXCR1A8MXD5 290 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 E7EWF7 191 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 ZBTB5O15062 677 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 CFBP00751 764 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 EIF2AK2P19525 551 aaKnown RBP15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 PBX2P40425 430 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 GRM4Q14833 912 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 NBPF20Q3BBV1 942 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 BRDTQ58F21 947 aaPredicted RBP15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 MAFAQ8NHW3 353 aaPredicted RBP15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 PPP1R13LQ8WUF5 828 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 TIFAQ96CG3 184 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 IWS1Q96ST2 819 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 PBX4Q9BYU1 374 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 PXMP2Q9NR77 195 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 MYO9BQ13459 2157 aa15.14■□□□□ 0.01
HMGCS1-205ENST00000508319 IFIT3O14879 490 aaKnown RBP15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 MMP3P08254 477 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 CYP2C9P11712 490 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 FOSL2P15408 326 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 ANTXR2P58335 489 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 ARHGAP1Q07960 439 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 TROAPQ12815 778 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 GRIN2CQ14957 1233 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 STXBP2Q15833 593 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 LY6KQ17RY6 165 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 NFRKBQ6P4R8 1299 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 SEPT14Q6ZU15 432 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 RALYLQ86SE5 291 aaKnown RBP15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 MB21D2Q8IYB1 491 aaPredicted RBP15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 SCLYQ96I15 445 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 ZNF576Q9H609 170 aa15.13■□□□□ 0.01
HMGCS1-205ENST00000508319 CYTH3O43739 400 aa15.12■□□□□ 0.01
HMGCS1-205ENST00000508319 KPNA6O60684 536 aa15.12■□□□□ 0.01
HMGCS1-205ENST00000508319 GH1P01241 217 aa15.12■□□□□ 0.01
HMGCS1-205ENST00000508319 SUPT20HL2P0C7V6 817 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms