RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 RAD51AP2Q09MP3 1159 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 RRP1BQ14684 758 aaKnown RBP16.22■□□□□ 0.19
DDX41-208ENST00000507955 SPICE1Q8N0Z3 855 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 MB21D1Q8N884 522 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 MNS1Q8NEH6 495 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 ANKRD20A12PQ8NF67 263 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 DDX25Q9UHL0 483 aaKnown RBP16.22■□□□□ 0.19
DDX41-208ENST00000507955 MYH4Q9Y623 1939 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
DDX41-208ENST00000507955 BMS1Q14692 1282 aaKnown RBP16.22■□□□□ 0.19
DDX41-208ENST00000507955 USH1GQ495M9 461 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 CNGA4Q8IV77 575 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 PRMT6Q96LA8 375 aaPredicted RBP16.22■□□□□ 0.19
DDX41-208ENST00000507955 C7orf25Q9BPX7 421 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 SEMA6BQ9H3T3 888 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 AGPAT5Q9NUQ2 364 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 TRIM10Q9UDY6 481 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 PCDHA1Q9Y5I3 950 aa16.22■□□□□ 0.19
DDX41-208ENST00000507955 STIM1Q13586 685 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 SV2BQ7L1I2 683 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 CUL5Q93034 780 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 P2RX5Q93086 422 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 TUBGCP2Q9BSJ2 902 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.21■□□□□ 0.19
DDX41-208ENST00000507955 MARCH6O60337 910 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
DDX41-208ENST00000507955 MAP3K9P80192 1104 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 SPAG1Q07617 926 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 SLFN13Q68D06 897 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 ZNF507Q8TCN5 953 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 LARP4BQ92615 738 aaKnown RBP16.21■□□□□ 0.19
DDX41-208ENST00000507955 TBC1D7Q9P0N9 293 aa16.21■□□□□ 0.19
DDX41-208ENST00000507955 ITIH6Q6UXX5 1313 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 EFCAB8A8MWE9 144 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
DDX41-208ENST00000507955 STAT3P40763 770 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 STRIP1Q5VSL9 837 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 CNOT6LQ96LI5 555 aaKnown RBP16.2■□□□□ 0.18
DDX41-208ENST00000507955 PI4KBQ9UBF8 816 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 RASSF10A6NK89 507 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 C21orf2O43822 256 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
DDX41-208ENST00000507955 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
DDX41-208ENST00000507955 ZNF569Q5MCW4 686 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 GPATCH4Q5T3I0 446 aaKnown RBP16.2■□□□□ 0.18
DDX41-208ENST00000507955 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 SCAF8Q9UPN6 1271 aaKnown RBP16.2■□□□□ 0.18
DDX41-208ENST00000507955 MRFAP1Q9Y605 127 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 MYH7BA7E2Y1 1941 aa16.2■□□□□ 0.18
DDX41-208ENST00000507955 NPHP3-ACAD11A0A0J9YXS1 232 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 YDJCA8MPS7 323 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 LGALS16A8MUM7 142 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 TPM1P09493 284 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 CCNE1P24864 410 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 FXR2P51116 673 aaKnown RBP eCLIP16.19■□□□□ 0.18
DDX41-208ENST00000507955 ICA1Q05084 483 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 DDX12PQ92771 950 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 ZBTB9Q96C00 473 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 FGFBP2Q9BYJ0 223 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 TRIM34Q9BYJ4 488 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 MAGEC2Q9UBF1 373 aaPredicted RBP16.19■□□□□ 0.18
DDX41-208ENST00000507955 CLRN2A0PK11 232 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 E9PMD0 336 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 F5H6K3 240 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 SASH3O75995 380 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 KLRC3Q07444 240 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
DDX41-208ENST00000507955 CUEDC2Q9H467 287 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 THAP9Q9H5L6 903 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 POLD4Q9HCU8 107 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 SMCHD1A6NHR9 2005 aa16.19■□□□□ 0.18
DDX41-208ENST00000507955 GH2P01242 217 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 MYL1P05976 194 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 MRPL12P52815 198 aaKnown RBP16.18■□□□□ 0.18
DDX41-208ENST00000507955 KRT79Q5XKE5 535 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 WDR59Q6PJI9 974 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 DHTKD1Q96HY7 919 aaPredicted RBP16.18■□□□□ 0.18
DDX41-208ENST00000507955 PCDHA12Q9UN75 941 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 SIPA1L1O43166 1804 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 QSER1Q2KHR3 1735 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 A0A1W2PRG0 241 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 TCP10L2B9ZVM9 353 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 hCG_1984214I3L0E3 225 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 MTIF2P46199 727 aaKnown RBP16.18■□□□□ 0.18
DDX41-208ENST00000507955 PPP2R3AQ06190 1150 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 TMCO3Q6UWJ1 677 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 CDAN1Q8IWY9 1227 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 ZNF713Q8N859 430 aaPredicted RBP16.18■□□□□ 0.18
DDX41-208ENST00000507955 RAD54LQ92698 747 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 MTMR8Q96EF0 704 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 PCMTD1Q96MG8 357 aaPredicted RBP16.18■□□□□ 0.18
DDX41-208ENST00000507955 NAA15Q9BXJ9 866 aaKnown RBP16.18■□□□□ 0.18
DDX41-208ENST00000507955 EHD4Q9H223 541 aa16.18■□□□□ 0.18
DDX41-208ENST00000507955 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
DDX41-208ENST00000507955 EEF1GP26641 437 aaKnown RBP16.17■□□□□ 0.18
DDX41-208ENST00000507955 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
DDX41-208ENST00000507955 AMPD3Q01432 767 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms