RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 HSPA1BP0DMV9 641 aaKnown RBP10.12□□□□□ -0.79
PFDN1-202ENST00000507185 PRELPP51888 382 aa10.12□□□□□ -0.79
PFDN1-202ENST00000507185 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
PFDN1-202ENST00000507185 CCDC84Q86UT8 332 aaPredicted RBP10.12□□□□□ -0.79
PFDN1-202ENST00000507185 TMEM40Q8WWA1 233 aa10.12□□□□□ -0.79
PFDN1-202ENST00000507185 BACH2Q9BYV9 841 aa10.12□□□□□ -0.79
PFDN1-202ENST00000507185 VTI1BQ9UEU0 232 aa10.12□□□□□ -0.79
PFDN1-202ENST00000507185 ADAM30Q9UKF2 790 aa10.12□□□□□ -0.79
PFDN1-202ENST00000507185 ST14Q9Y5Y6 855 aa10.12□□□□□ -0.79
PFDN1-202ENST00000507185 BPNT1O95861 308 aa10.11□□□□□ -0.79
PFDN1-202ENST00000507185 KIR3DL1P43629 444 aa10.11□□□□□ -0.79
PFDN1-202ENST00000507185 MCATQ8IVS2 390 aaKnown RBP10.11□□□□□ -0.79
PFDN1-202ENST00000507185 JMYQ8N9B5 988 aa10.11□□□□□ -0.79
PFDN1-202ENST00000507185 RGPD2P0DJD1 1756 aa10.11□□□□□ -0.79
PFDN1-202ENST00000507185 F6X3S4 739 aa10.1□□□□□ -0.79
PFDN1-202ENST00000507185 RPS6KA4O75676 772 aa10.1□□□□□ -0.79
PFDN1-202ENST00000507185 ETV3P41162 512 aa10.1□□□□□ -0.79
PFDN1-202ENST00000507185 CAMK2GQ13555 558 aaPredicted RBP10.1□□□□□ -0.79
PFDN1-202ENST00000507185 MRPL58Q14197 206 aaKnown RBP10.1□□□□□ -0.79
PFDN1-202ENST00000507185 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
PFDN1-202ENST00000507185 BNC2Q6ZN30 1099 aaPredicted RBP10.1□□□□□ -0.79
PFDN1-202ENST00000507185 RELL1Q8IUW5 271 aa10.1□□□□□ -0.79
PFDN1-202ENST00000507185 BCL11AQ9H165 835 aa10.1□□□□□ -0.79
PFDN1-202ENST00000507185 TOGARAM1Q9Y4F4 1720 aa10.1□□□□□ -0.79
PFDN1-202ENST00000507185 C8AP07357 584 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 HSP90AB1P08238 724 aaKnown RBP10.09□□□□□ -0.79
PFDN1-202ENST00000507185 PLCG1P19174 1290 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 KCNA3P22001 575 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 ERCC5P28715 1186 aaPredicted RBP10.09□□□□□ -0.79
PFDN1-202ENST00000507185 CRKLP46109 303 aaKnown RBP10.09□□□□□ -0.79
PFDN1-202ENST00000507185 LMNB2Q03252 620 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 THAP5Q7Z6K1 395 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 UBE2FQ969M7 185 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 ACSF2Q96CM8 615 aaPredicted RBP10.09□□□□□ -0.79
PFDN1-202ENST00000507185 ZSWIM5Q9P217 1185 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 CTNND2Q9UQB3 1225 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 CORINQ9Y5Q5 1042 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 KIF24Q5T7B8 1368 aa10.09□□□□□ -0.79
PFDN1-202ENST00000507185 CILPO75339 1184 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 PF4P02776 101 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 GBP2P32456 591 aaPredicted RBP10.08□□□□□ -0.8
PFDN1-202ENST00000507185 AFMP43652 599 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 MTHFSP49914 203 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 HDLBPQ00341 1268 aaKnown RBP10.08□□□□□ -0.8
PFDN1-202ENST00000507185 TNK2Q07912 1038 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 DDR1Q08345 913 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
PFDN1-202ENST00000507185 C1orf141Q5JVX7 400 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 ZSWIM9Q86XI8 627 aa10.08□□□□□ -0.8
PFDN1-202ENST00000507185 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
PFDN1-202ENST00000507185 KDRP35968 1356 aa10.07□□□□□ -0.8
PFDN1-202ENST00000507185 ERVV-2B6SEH9 535 aa10.07□□□□□ -0.8
PFDN1-202ENST00000507185 VEGFAP15692 232 aaPredicted RBP10.07□□□□□ -0.8
PFDN1-202ENST00000507185 EIF4A2Q14240 407 aaKnown RBP10.07□□□□□ -0.8
PFDN1-202ENST00000507185 KCNMB1Q16558 191 aa10.07□□□□□ -0.8
PFDN1-202ENST00000507185 ZNF648Q5T619 568 aaPredicted RBP10.07□□□□□ -0.8
PFDN1-202ENST00000507185 GATAD2BQ8WXI9 593 aa10.07□□□□□ -0.8
PFDN1-202ENST00000507185 TMEM74Q96NL1 305 aa10.07□□□□□ -0.8
PFDN1-202ENST00000507185 CEP131Q9UPN4 1083 aa10.07□□□□□ -0.8
PFDN1-202ENST00000507185 FAM221AA4D161 298 aa10.06□□□□□ -0.8
PFDN1-202ENST00000507185 FARP2O94887 1054 aaPredicted RBP10.06□□□□□ -0.8
PFDN1-202ENST00000507185 PWP1Q13610 501 aa10.06□□□□□ -0.8
PFDN1-202ENST00000507185 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
PFDN1-202ENST00000507185 FAM13CQ8NE31 585 aa10.06□□□□□ -0.8
PFDN1-202ENST00000507185 PIWIL2Q8TC59 973 aaKnown RBP10.06□□□□□ -0.8
PFDN1-202ENST00000507185 RSRP1Q9BUV0 290 aa10.06□□□□□ -0.8
PFDN1-202ENST00000507185 POLKQ9UBT6 870 aa10.06□□□□□ -0.8
PFDN1-202ENST00000507185 USP42Q9H9J4 1324 aaKnown RBP10.06□□□□□ -0.8
PFDN1-202ENST00000507185 WDR90Q96KV7 1748 aa10.05□□□□□ -0.8
PFDN1-202ENST00000507185 UBR3Q6ZT12 1888 aa10.05□□□□□ -0.8
PFDN1-202ENST00000507185 POLRMTO00411 1230 aaKnown RBP10.05□□□□□ -0.8
PFDN1-202ENST00000507185 SCAMP3O14828 347 aaKnown RBP10.05□□□□□ -0.8
PFDN1-202ENST00000507185 F13A1P00488 732 aa10.05□□□□□ -0.8
PFDN1-202ENST00000507185 YARSP54577 528 aaKnown RBP10.05□□□□□ -0.8
PFDN1-202ENST00000507185 C2CD5Q86YS7 1000 aa10.05□□□□□ -0.8
PFDN1-202ENST00000507185 DNAJB8Q8NHS0 232 aa10.05□□□□□ -0.8
PFDN1-202ENST00000507185 UBXN4Q92575 508 aa10.05□□□□□ -0.8
PFDN1-202ENST00000507185 N4BP2Q86UW6 1770 aaPredicted RBP10.04□□□□□ -0.8
PFDN1-202ENST00000507185 GLTPD2A6NH11 291 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 UPK3BL1B0FP48 263 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 UPK3BL2E5RIL1 263 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 RBAK-RBAKDNI3L0D1 243 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 NPHP1O15259 732 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 CYB5D2Q8WUJ1 264 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 ZNF622Q969S3 477 aaKnown RBP eCLIP10.04□□□□□ -0.8
PFDN1-202ENST00000507185 CCDC120Q96HB5 630 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 RHOVQ96L33 236 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 FAM53CQ9NYF3 392 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 TAF1LQ8IZX4 1826 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
PFDN1-202ENST00000507185 MINDY4BA8MYZ0 360 aa10.03□□□□□ -0.8
PFDN1-202ENST00000507185 CDK11BP21127 795 aaKnown RBP10.03□□□□□ -0.8
PFDN1-202ENST00000507185 GDNFP39905 211 aa10.03□□□□□ -0.8
PFDN1-202ENST00000507185 FZD5Q13467 585 aa10.03□□□□□ -0.8
PFDN1-202ENST00000507185 SF3A1Q15459 793 aaKnown RBP10.03□□□□□ -0.8
PFDN1-202ENST00000507185 AMOTQ4VCS5 1084 aa10.03□□□□□ -0.8
PFDN1-202ENST00000507185 TMEM201Q5SNT2 666 aa10.03□□□□□ -0.8
PFDN1-202ENST00000507185 SNAP47Q5SQN1 464 aa10.03□□□□□ -0.8
PFDN1-202ENST00000507185 DNAJC10Q8IXB1 793 aa10.03□□□□□ -0.8
PFDN1-202ENST00000507185 TTLL6Q8N841 843 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms