RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 ANAPC16Q96DE5 110 aa5.33□□□□□ -1.56
AFP-203ENST00000506820 PEX11GQ96HA9 241 aa5.33□□□□□ -1.56
AFP-203ENST00000506820 SHDQ96IW2 340 aa5.33□□□□□ -1.56
AFP-203ENST00000506820 CGGBP1Q9UFW8 167 aaPredicted RBP5.33□□□□□ -1.56
AFP-203ENST00000506820 IRS2Q9Y4H2 1338 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 CUL7Q14999 1698 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 ZC3H12DA2A288 527 aaKnown RBP5.32□□□□□ -1.56
AFP-203ENST00000506820 PRRG2O14669 202 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 SSBP05455 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
AFP-203ENST00000506820 MSL3P1P0C860 447 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 TRIM26Q12899 539 aaPredicted RBP5.32□□□□□ -1.56
AFP-203ENST00000506820 NFIXQ14938 502 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 LINC01356Q8N9X3 169 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 ALG3Q92685 438 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 KCNC2Q96PR1 638 aa5.32□□□□□ -1.56
AFP-203ENST00000506820 NUP160Q12769 1436 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 CEP170Q5SW79 1584 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 CEBPAP49715 358 aaPredicted RBP5.31□□□□□ -1.56
AFP-203ENST00000506820 FOXO4P98177 505 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 CAP1Q01518 475 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 TNNI3KQ59H18 835 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 IQCEQ6IPM2 695 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 TMEFF1Q8IYR6 380 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 NETO2Q8NC67 525 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 BVESQ8NE79 360 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 KLHL6Q8WZ60 621 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 ACBD3Q9H3P7 528 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 LUC7LQ9NQ29 371 aaKnown RBP5.31□□□□□ -1.56
AFP-203ENST00000506820 CHD1O14646 1710 aa5.31□□□□□ -1.56
AFP-203ENST00000506820 KIF21BO75037 1637 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 LOC105371045A0A1W2PR82 267 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 TRIM13O60858 407 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 KCNH1O95259 989 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 GLI4P10075 376 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 SYN1P17600 705 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 KCNC1P48547 511 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 CPNE8Q86YQ8 564 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 PCDH18Q9HCL0 1135 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.3□□□□□ -1.56
AFP-203ENST00000506820 LRP2BPQ9P2M1 347 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 RWDD3Q9Y3V2 267 aa5.3□□□□□ -1.56
AFP-203ENST00000506820 NCANO14594 1321 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 GOLGA3Q08378 1498 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 ERCC5P28715 1186 aaPredicted RBP5.29□□□□□ -1.56
AFP-203ENST00000506820 VMACQ2NL98 169 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 TSPAN17Q96FV3 270 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 AP5M1Q9H0R1 490 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 EPB41L4AQ9HCS5 686 aaPredicted RBP5.29□□□□□ -1.56
AFP-203ENST00000506820 CYP26B1Q9NR63 512 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 SUSD2Q9UGT4 822 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 EMC9Q9Y3B6 208 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 R3HCC1Q9Y3T6 440 aaKnown RBP5.29□□□□□ -1.56
AFP-203ENST00000506820 CCDC9Q9Y3X0 531 aaKnown RBP5.29□□□□□ -1.56
AFP-203ENST00000506820 PMF1-BGLAPU3KQ54 211 aa5.29□□□□□ -1.56
AFP-203ENST00000506820 CLASP1Q7Z460 1538 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 FOXD2O60548 495 aaPredicted RBP5.28□□□□□ -1.56
AFP-203ENST00000506820 FUCA1P04066 466 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 ATF4P18848 351 aaPredicted RBP5.28□□□□□ -1.56
AFP-203ENST00000506820 IGFBP6P24592 240 aaPredicted RBP5.28□□□□□ -1.56
AFP-203ENST00000506820 LIMS1P48059 325 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 SCRN1Q12765 414 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 DCP2Q8IU60 420 aaKnown RBP5.28□□□□□ -1.56
AFP-203ENST00000506820 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 MMP19Q99542 508 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 MCMBPQ9BTE3 642 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 USP40Q9NVE5 1235 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 ACTR10Q9NZ32 417 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 RTEL1Q9NZ71 1219 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 CLEC1BQ9P126 229 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 KIAA1522Q9P206 1035 aaPredicted RBP5.28□□□□□ -1.56
AFP-203ENST00000506820 GULP1Q9UBP9 304 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 KIAA0586Q9BVV6 1533 aa5.28□□□□□ -1.56
AFP-203ENST00000506820 C7orf72A4D263 438 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 AGRPO00253 132 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 MYO1BO43795 1136 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 ASGR2P07307 311 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 GTF2A2P52657 109 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 FXNQ16595 210 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 SV2CQ496J9 727 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 WWC2Q6AWC2 1192 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 TTLL7Q6ZT98 887 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 B3GNT8Q7Z7M8 397 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 ZDHHC14Q8IZN3 488 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 CXorf38Q8TB03 319 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 DDX11Q96FC9 970 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 C20orf173Q96LM9 149 aa5.27□□□□□ -1.57
AFP-203ENST00000506820 OTOL1A6NHN0 477 aaPredicted RBP5.26□□□□□ -1.57
AFP-203ENST00000506820 SMARCA5O60264 1052 aaPredicted RBP5.26□□□□□ -1.57
AFP-203ENST00000506820 DDAH1O94760 285 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 PLS3P13797 630 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 HOXC12P31275 282 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 LARP1BQ659C4 914 aaKnown RBP5.26□□□□□ -1.57
AFP-203ENST00000506820 GTF2IRD2BQ6EKJ0 949 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 FRMD5Q7Z6J6 570 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 GTF2IRD2Q86UP8 949 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 TRIM59Q8IWR1 403 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 FEZF2Q8TBJ5 459 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 CPA5Q8WXQ8 436 aa5.26□□□□□ -1.57
AFP-203ENST00000506820 COPS5Q92905 334 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms