RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 NLRP5P59047 1200 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 MLLT1Q03111 559 aaPredicted RBP14.74□□□□□ -0.05
TCOF1-210ENST00000506767 UBE2SQ16763 222 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 GALNT17Q6IS24 598 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 NSUN6Q8TEA1 469 aaKnown RBP14.74□□□□□ -0.05
TCOF1-210ENST00000506767 TINF2Q9BSI4 451 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 PXMP2Q9NR77 195 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 PCDHA4Q9UN74 947 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 KCNJ14Q9UNX9 436 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 LRRC37A2A6NM11 1700 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 ASB14A6NK59 587 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 SNAI1O95863 264 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-210ENST00000506767 FOSP01100 380 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-210ENST00000506767 HMGCRP04035 888 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 MAP3K21Q5TCX8 1036 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 FCHSD1Q86WN1 690 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 FAM184AQ8NB25 1140 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 BICD2Q8TD16 824 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 IWS1Q96ST2 819 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 RMDN3Q96TC7 470 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 SMC3Q9UQE7 1217 aa14.73□□□□□ -0.05
TCOF1-210ENST00000506767 MMP1P03956 469 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 TRIM32Q13049 653 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 AP3B2Q13367 1082 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 PGM5Q15124 567 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 KRT40Q6A162 431 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 MCTP2Q6DN12 878 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 ARMCX2Q7L311 632 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 BLIDQ8IZY5 108 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 REXO1Q8N1G1 1221 aaKnown RBP14.72□□□□□ -0.05
TCOF1-210ENST00000506767 FBXO18Q8NFZ0 1043 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 C8orf76Q96K31 380 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 PDCD2LQ9BRP1 358 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 KATNBL1Q9H079 304 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 TMEM260Q9NX78 707 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 BIN2Q9UBW5 565 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-210ENST00000506767 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
TCOF1-210ENST00000506767 MCM3APO60318 1980 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 SPDYE3A6NKU9 549 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 B4DLN1 442 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 NR3C2P08235 984 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 EIF2AK2P19525 551 aaKnown RBP14.71□□□□□ -0.05
TCOF1-210ENST00000506767 CYP2C19P33261 490 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 SOX10P56693 466 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 CACNB2Q08289 660 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-210ENST00000506767 SLC9C1Q4G0N8 1177 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 ARHGEF16Q5VV41 709 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 MFSD14CQ5VZR4 134 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 SH3TC2Q8TF17 1288 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 ARMC5Q96C12 935 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-210ENST00000506767 NRBP1Q9UHY1 535 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 KIF3AQ9Y496 699 aa14.71□□□□□ -0.05
TCOF1-210ENST00000506767 DDX49Q9Y6V7 483 aaKnown RBP14.71□□□□□ -0.05
TCOF1-210ENST00000506767 INHAP05111 366 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 ZNF865P0CJ78 1059 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-210ENST00000506767 CYBAP13498 195 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 TRIM29Q14134 588 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 JAKMIP3Q5VZ66 844 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 VSIG10LQ86VR7 867 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 TRPV1Q8NER1 839 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 IL31RAQ8NI17 732 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 RASGRP4Q8TDF6 673 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 OXER1Q8TDS5 423 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 CRYGNQ8WXF5 182 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 TNFRSF25Q93038 417 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 MPHOSPH6Q99547 160 aaKnown RBP14.7□□□□□ -0.06
TCOF1-210ENST00000506767 ANO3Q9BYT9 981 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 ABHD16BQ9H3Z7 469 aa14.7□□□□□ -0.06
TCOF1-210ENST00000506767 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
TCOF1-210ENST00000506767 SREBF1P36956 1147 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 RGS19P49795 217 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 FOSBP53539 338 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 UBXN2AP68543 259 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 MRPS9P82933 396 aaKnown RBP14.69□□□□□ -0.06
TCOF1-210ENST00000506767 PDE4DQ08499 809 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 ACVR2BQ13705 512 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 STXBP2Q15833 593 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 PRAMEF19Q5SWL8 479 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 PCNX4Q63HM2 1172 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 XRRA1Q6P2D8 792 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 ZNF333Q96JL9 665 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 PGBD1Q96JS3 809 aa14.69□□□□□ -0.06
TCOF1-210ENST00000506767 RBM47A0AV96 593 aaKnown RBP14.68□□□□□ -0.06
TCOF1-210ENST00000506767 BTBD18B2RXH4 712 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 EDIL3O43854 480 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 EIF3JO75822 258 aaKnown RBP14.68□□□□□ -0.06
TCOF1-210ENST00000506767 CYP3A4P08684 503 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 CCND2P30279 289 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 KRT2P35908 639 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 GUCY1B3Q02153 619 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 BECN1Q14457 450 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 TAPT1Q6NXT6 567 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 DIS3L2Q8IYB7 885 aaKnown RBP14.68□□□□□ -0.06
TCOF1-210ENST00000506767 EHMT1Q9H9B1 1298 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 VTA1Q9NP79 307 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 FOXD4L1Q9NU39 408 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 CNPY2Q9Y2B0 182 aa14.68□□□□□ -0.06
TCOF1-210ENST00000506767 KIAA1217Q5T5P2 1943 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms