RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 MYCNP04198 464 aaPredicted RBP18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 CALM1P0DP23 149 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 CALM2P0DP24 149 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 CALM3P0DP25 149 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 SCP2P22307 547 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 CCDC121Q6ZUS5 278 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 CASKIN2Q8WXE0 1202 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 MTMR8Q96EF0 704 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 TMBIM4Q9HC24 238 aa18.93■□□□□ 0.62
SQSTM1-211ENST00000506690 AKR1B10O60218 316 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 GUCY2FP51841 1108 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 NLRP5P59047 1200 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 SNCBQ16143 134 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 CYB5D1Q6P9G0 228 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 FAM228AQ86W67 206 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 PARP9Q8IXQ6 854 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 FUKQ8N0W3 1084 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 RNF10Q8N5U6 811 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 CCDC114Q96M63 670 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 SIK3Q9Y2K2 1263 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 GOLGA6L7A0A1B0GV03 622 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 CCDC189A1A4V9 331 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 ERVV-2B6SEH9 535 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 EPHB6O15197 1021 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 HSPA9P38646 679 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 MAGEA1P43355 309 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 CCDC50Q8IVM0 306 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 ARFGAP2Q8N6H7 521 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 NOX5Q96PH1 765 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 OSBPL7Q9BZF2 842 aa18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 DDX20Q9UHI6 824 aaKnown RBP18.92■□□□□ 0.62
SQSTM1-211ENST00000506690 MINDY4BA8MYZ0 360 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 ASTE1Q2TB18 679 aaPredicted RBP18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 SRBD1Q8N5C6 995 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 MIGA1Q8NAN2 632 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 CENPHQ9H3R5 247 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 TNS2Q63HR2 1409 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 DUOX1Q9NRD9 1551 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 SMIM22K7EJ46 135 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 DDAH1O94760 285 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 SCG2P13521 617 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 GCFC2P16383 781 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 SGSM3Q96HU1 749 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 PPANQ9NQ55 473 aaKnown RBP18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 PLCB1Q9NQ66 1216 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 SLC12A6Q9UHW9 1150 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 PLAAQ9Y263 795 aa18.91■□□□□ 0.62
SQSTM1-211ENST00000506690 LRP5O75197 1615 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 NHSL1Q5SYE7 1610 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 GMNCA6NCL1 334 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 PP2D1A8MPX8 630 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 DNM1LO00429 736 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 SPRED3Q2MJR0 410 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 LRIG3Q6UXM1 1119 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 KIF6Q6ZMV9 814 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 ANKRD13CQ8N6S4 541 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 LRRC15Q8TF66 581 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 CCSER1Q9C0I3 900 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 GRID2IPA4D2P6 1211 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 TRAPPC3O43617 180 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 EVA1CP58658 441 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 ANKRD20A8PQ5CZ79 823 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 DTHD1Q6ZMT9 781 aa18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 HELBQ8NG08 1087 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
SQSTM1-211ENST00000506690 BAZ2BQ9UIF8 2168 aaKnown RBP18.89■□□□□ 0.62
SQSTM1-211ENST00000506690 MROH5Q6ZUA9 1318 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 PDHBP11177 359 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 ATP2B2Q01814 1243 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 TRADDQ15628 312 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 CDC37Q16543 378 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 PFKFB3Q16875 520 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 NLRP10Q86W26 655 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 LRRC53A6NM62 1247 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 BUB1O43683 1085 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 MYBP10242 640 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 VEGFAP15692 232 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 HPDP32754 393 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 PPP1R2P41236 205 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 RASSF7Q02833 373 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 STK4Q13043 487 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 MAATS1Q7Z4T9 603 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 RASSF8Q8NHQ8 419 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 ZCRB1Q8TBF4 217 aaKnown RBP18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 SDR42E1Q8WUS8 393 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 FAM212AQ96EL1 285 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 KRT12Q99456 494 aa18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 FAM207AQ9NSI2 230 aaPredicted RBP18.89■□□□□ 0.61
SQSTM1-211ENST00000506690 C5orf60A6NFR6 353 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 H0YGN5 161 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 SLC5A1P13866 664 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 UBA7P41226 1012 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 VWA3BQ502W6 1294 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 LACTB2Q53H82 288 aaPredicted RBP18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 GIGYF2Q6Y7W6 1299 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 EIF1ADQ8N9N8 165 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 BAP1Q92560 729 aa18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 TPX2Q9ULW0 747 aaKnown RBP18.88■□□□□ 0.61
SQSTM1-211ENST00000506690 NFS1Q9Y697 457 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms