RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 TNFAIP2Q03169 654 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 IQSEC1Q6DN90 963 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 DPF3Q92784 378 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 GPKOWQ92917 476 aaPredicted RBP eCLIP20.61■□□□□ 0.89
SMN1-204ENST00000506163 SENP6Q9GZR1 1112 aaPredicted RBP20.61■□□□□ 0.89
SMN1-204ENST00000506163 PDRG1Q9NUG6 133 aa20.61■□□□□ 0.89
SMN1-204ENST00000506163 GCOM1H8Y6P7 765 aaPredicted RBP20.6■□□□□ 0.89
SMN1-204ENST00000506163 MEIS2O14770 477 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 POLR2MP0CAP2 368 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 GJA9P57773 515 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 CCT2P78371 535 aaKnown RBP20.6■□□□□ 0.89
SMN1-204ENST00000506163 PDE4DQ08499 809 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 TRAF1Q13077 416 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 NTRK3Q16288 839 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 LRRC26Q2I0M4 334 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 USP17L6PQ6QN14 398 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 FCHSD1Q86WN1 690 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 IL31RAQ8NI17 732 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 HTATIP2Q9BUP3 242 aa20.6■□□□□ 0.89
SMN1-204ENST00000506163 UPF3AQ9H1J1 476 aaKnown RBP20.6■□□□□ 0.89
SMN1-204ENST00000506163 NCOA5Q9HCD5 579 aaKnown RBP20.6■□□□□ 0.89
SMN1-204ENST00000506163 MAP3K20Q9NYL2 800 aaKnown RBP20.6■□□□□ 0.89
SMN1-204ENST00000506163 PPFIA3O75145 1194 aa20.59■□□□□ 0.89
SMN1-204ENST00000506163 NKX3-2P78367 333 aa20.59■□□□□ 0.89
SMN1-204ENST00000506163 ARHGEF16Q5VV41 709 aa20.59■□□□□ 0.89
SMN1-204ENST00000506163 WWC2Q6AWC2 1192 aa20.59■□□□□ 0.89
SMN1-204ENST00000506163 SAMD3Q8N6K7 520 aa20.59■□□□□ 0.89
SMN1-204ENST00000506163 FERMT2Q96AC1 680 aa20.59■□□□□ 0.89
SMN1-204ENST00000506163 NR3C2P08235 984 aa20.58■□□□□ 0.88
SMN1-204ENST00000506163 PPP2R5BQ15173 497 aa20.58■□□□□ 0.88
SMN1-204ENST00000506163 ZFP91Q96JP5 570 aaPredicted RBP20.58■□□□□ 0.88
SMN1-204ENST00000506163 IWS1Q96ST2 819 aa20.58■□□□□ 0.88
SMN1-204ENST00000506163 PDCD2LQ9BRP1 358 aa20.58■□□□□ 0.88
SMN1-204ENST00000506163 WDR11Q9BZH6 1224 aa20.58■□□□□ 0.88
SMN1-204ENST00000506163 PCDH10Q9P2E7 1040 aa20.58■□□□□ 0.88
SMN1-204ENST00000506163 PHF24Q9UPV7 400 aa20.58■□□□□ 0.88
SMN1-204ENST00000506163 KBTBD13C9JR72 458 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 RGS20O76081 388 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 ARIH2O95376 493 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 C6orf222P0C671 652 aaPredicted RBP20.57■□□□□ 0.88
SMN1-204ENST00000506163 ATN1P54259 1190 aaPredicted RBP20.57■□□□□ 0.88
SMN1-204ENST00000506163 BEX3Q00994 111 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 KCNA10Q16322 511 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 PKN1Q16512 942 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 DUSP28Q4G0W2 176 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 NOL8Q76FK4 1167 aaKnown RBP20.57■□□□□ 0.88
SMN1-204ENST00000506163 HEATR3Q7Z4Q2 680 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 RNF180Q86T96 592 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 COPS5Q92905 334 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 PHKBQ93100 1093 aa20.57■□□□□ 0.88
SMN1-204ENST00000506163 H0YGN5 161 aa20.56■□□□□ 0.88
SMN1-204ENST00000506163 PIK3CDO00329 1044 aa20.56■□□□□ 0.88
SMN1-204ENST00000506163 DYNC1LI2O43237 492 aaPredicted RBP20.56■□□□□ 0.88
SMN1-204ENST00000506163 CST5P28325 142 aaPredicted RBP20.56■□□□□ 0.88
SMN1-204ENST00000506163 PGM5Q15124 567 aa20.56■□□□□ 0.88
SMN1-204ENST00000506163 CCDC62Q6P9F0 684 aa20.56■□□□□ 0.88
SMN1-204ENST00000506163 TLK2Q86UE8 772 aa20.56■□□□□ 0.88
SMN1-204ENST00000506163 VSIG10LQ86VR7 867 aa20.56■□□□□ 0.88
SMN1-204ENST00000506163 ZNF274Q96GC6 653 aaPredicted RBP20.56■□□□□ 0.88
SMN1-204ENST00000506163 ALDH8A1Q9H2A2 487 aaPredicted RBP20.56■□□□□ 0.88
SMN1-204ENST00000506163 PSTPIP2Q9H939 334 aa20.56■□□□□ 0.88
SMN1-204ENST00000506163 CCDC196A0A1B0GTZ2 297 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 STXBP3O00186 592 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 STXBP2Q15833 593 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 SLC39A5Q6ZMH5 540 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 SEPT14Q6ZU15 432 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 KIF2CQ99661 725 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 TPCN1Q9ULQ1 816 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 FRMPD4Q14CM0 1322 aa20.55■□□□□ 0.88
SMN1-204ENST00000506163 A0A1W2PQ45 241 aaPredicted RBP20.54■□□□□ 0.88
SMN1-204ENST00000506163 A0A1W2PQY0 241 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 B4DLN1 442 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 ADAMTS3O15072 1205 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 PRPF3O43395 683 aaKnown RBP20.54■□□□□ 0.88
SMN1-204ENST00000506163 EVI5O60447 810 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 EIF3JO75822 258 aaKnown RBP20.54■□□□□ 0.88
SMN1-204ENST00000506163 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
SMN1-204ENST00000506163 MRPL12P52815 198 aaKnown RBP20.54■□□□□ 0.88
SMN1-204ENST00000506163 ACLYP53396 1101 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 AK2P54819 239 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 UBE2SQ16763 222 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 GNASQ5JWF2 1037 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 MPHOSPH6Q99547 160 aaKnown RBP20.54■□□□□ 0.88
SMN1-204ENST00000506163 TSEN34Q9BSV6 310 aaKnown RBP20.54■□□□□ 0.88
SMN1-204ENST00000506163 Q9Y3F1 56 aa20.54■□□□□ 0.88
SMN1-204ENST00000506163 DTNBO60941 627 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 IFNAR1P17181 557 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 MRPS9P82933 396 aaKnown RBP20.53■□□□□ 0.88
SMN1-204ENST00000506163 STK3Q13188 491 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 PFKFB3Q16875 520 aaPredicted RBP20.53■□□□□ 0.88
SMN1-204ENST00000506163 PRPF38BQ5VTL8 546 aaKnown RBP20.53■□□□□ 0.88
SMN1-204ENST00000506163 C7orf61Q8IZ16 206 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 SCFD2Q8WU76 684 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 BARHL2Q9NY43 387 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 KIAA1217Q5T5P2 1943 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 EIF5BO60841 1220 aaKnown RBP20.53■□□□□ 0.88
SMN1-204ENST00000506163 ASGR1P07306 291 aa20.53■□□□□ 0.88
SMN1-204ENST00000506163 TXNP10599 105 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms