RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 SMPD1P17405 629 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 ACLYP53396 1101 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 ATN1P54259 1190 aaPredicted RBP13.19□□□□□ -0.3
KDM3B-203ENST00000505756 SNX17Q15036 470 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 C1orf53Q5VUE5 145 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
KDM3B-203ENST00000505756 TLK2Q86UE8 772 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
KDM3B-203ENST00000505756 FBXL16Q8N461 479 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 PCSK9Q8NBP7 692 aaKnown RBP13.19□□□□□ -0.3
KDM3B-203ENST00000505756 PIBF1Q8WXW3 757 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 FERMT2Q96AC1 680 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 BRPF3Q9ULD4 1205 aa13.19□□□□□ -0.3
KDM3B-203ENST00000505756 DNAH12Q6ZR08 3092 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
KDM3B-203ENST00000505756 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
KDM3B-203ENST00000505756 RPS6KB1P23443 525 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 PPP2R5BQ15173 497 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 RABEP1Q15276 862 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 KCNA10Q16322 511 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 RTN1Q16799 776 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 DUSP28Q4G0W2 176 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 GNASQ5JWF2 1037 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 Q6ZUG5 572 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 SCFD2Q8WU76 684 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 WDR11Q9BZH6 1224 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 TM6SF1Q9BZW5 370 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 AP5M1Q9H0R1 490 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 PXMP2Q9NR77 195 aa13.18□□□□□ -0.3
KDM3B-203ENST00000505756 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 GOLGA8BA8MQT2 603 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 NKRFO15226 690 aaKnown RBP eCLIP13.17□□□□□ -0.3
KDM3B-203ENST00000505756 CTAGE5O15320 804 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 DYNC1LI2O43237 492 aaPredicted RBP13.17□□□□□ -0.3
KDM3B-203ENST00000505756 ASGR1P07306 291 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
KDM3B-203ENST00000505756 HOXA13P31271 388 aaPredicted RBP13.17□□□□□ -0.3
KDM3B-203ENST00000505756 RTP1P59025 263 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 IRX5P78411 483 aaPredicted RBP13.17□□□□□ -0.3
KDM3B-203ENST00000505756 STXBP2Q15833 593 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 CCDC82Q8N4S0 544 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 BRF1Q92994 677 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 GLT1D1Q96MS3 346 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 STARD7Q9NQZ5 370 aa13.17□□□□□ -0.3
KDM3B-203ENST00000505756 ELP1O95163 1332 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 ZEB2O60315 1214 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 EIF3JO75822 258 aaKnown RBP13.16□□□□□ -0.3
KDM3B-203ENST00000505756 NR3C2P08235 984 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 ANP32AP39687 249 aaKnown RBP13.16□□□□□ -0.3
KDM3B-203ENST00000505756 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
KDM3B-203ENST00000505756 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 TTLL4Q14679 1199 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
KDM3B-203ENST00000505756 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 RUFY3Q7L099 469 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 PDCD2LQ9BRP1 358 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 ZSWIM6Q9HCJ5 1215 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 ZMYND8Q9ULU4 1186 aaPredicted RBP13.16□□□□□ -0.3
KDM3B-203ENST00000505756 ATP11BQ9Y2G3 1177 aa13.16□□□□□ -0.3
KDM3B-203ENST00000505756 CNTNAP5Q8WYK1 1306 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 PIK3CDO00329 1044 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 TXNP10599 105 aaKnown RBP13.15□□□□□ -0.3
KDM3B-203ENST00000505756 SYN1P17600 705 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 BEX3Q00994 111 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 FUT2Q10981 343 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 PGM5Q15124 567 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 TRIM60Q495X7 471 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 CUL5Q93034 780 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 SNX21Q969T3 373 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 FAM217BQ9NTX9 383 aaPredicted RBP13.15□□□□□ -0.3
KDM3B-203ENST00000505756 NAP1L2Q9ULW6 460 aaPredicted RBP13.15□□□□□ -0.3
KDM3B-203ENST00000505756 COLQQ9Y215 455 aaPredicted RBP13.15□□□□□ -0.3
KDM3B-203ENST00000505756 CYP46A1Q9Y6A2 500 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 NID2Q14112 1375 aa13.15□□□□□ -0.3
KDM3B-203ENST00000505756 BAZ2BQ9UIF8 2168 aaKnown RBP13.15□□□□□ -0.3
KDM3B-203ENST00000505756 FRMPD4Q14CM0 1322 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 CABYRO75952 493 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 PTGS1P23219 599 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 CDC27P30260 824 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 CPT1AP50416 773 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 EVCP57679 992 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
KDM3B-203ENST00000505756 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 VSIG10LQ86VR7 867 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 OR6J1Q8NGC5 347 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 SMARCC2Q8TAQ2 1214 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 PRO3102Q9H379 93 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 PRKAG2Q9UGJ0 569 aa13.14□□□□□ -0.31
KDM3B-203ENST00000505756 MROH7Q68CQ1 1323 aa13.13□□□□□ -0.31
KDM3B-203ENST00000505756 A0A0U1RQG5 324 aaPredicted RBP13.13□□□□□ -0.31
KDM3B-203ENST00000505756 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms