RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 CTSWP56202 376 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 TRIM29Q14134 588 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 HIBCHQ6NVY1 386 aaPredicted RBP14.66□□□□□ -0.06
LETM1-203ENST00000505551 DRAXINQ8NBI3 349 aaPredicted RBP14.66□□□□□ -0.06
LETM1-203ENST00000505551 OSBPL9Q96SU4 736 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 SENP2Q9HC62 589 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 DUSP10Q9Y6W6 482 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 UBR2Q8IWV8 1755 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 KCNJ18B7U540 433 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 M0R2C6 588 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 CSF1RP07333 972 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 CARSP49589 748 aaKnown RBP14.66□□□□□ -0.06
LETM1-203ENST00000505551 HAND2P61296 217 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 KCNJ12Q14500 433 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 IMMTQ16891 758 aaKnown RBP14.66□□□□□ -0.06
LETM1-203ENST00000505551 NCOA7Q8NI08 942 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 IQSEC3Q9UPP2 1182 aaPredicted RBP14.66□□□□□ -0.06
LETM1-203ENST00000505551 SPEF2Q9C093 1822 aa14.66□□□□□ -0.06
LETM1-203ENST00000505551 RNF113AO15541 343 aaKnown RBP14.65□□□□□ -0.06
LETM1-203ENST00000505551 TOM1O60784 492 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 TCP1P17987 556 aaKnown RBP14.65□□□□□ -0.06
LETM1-203ENST00000505551 METAP2P50579 478 aaKnown RBP eCLIP14.65□□□□□ -0.06
LETM1-203ENST00000505551 UBXN1Q04323 297 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
LETM1-203ENST00000505551 CDC37Q16543 378 aaPredicted RBP14.65□□□□□ -0.06
LETM1-203ENST00000505551 THEMIS2Q5TEJ8 643 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 CCDC170Q8IYT3 715 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 PHKBQ93100 1093 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 PAGE5Q96GU1 130 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 TSGA10Q9BZW7 698 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 NDST4Q9H3R1 872 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 CCDC87Q9NVE4 849 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.65□□□□□ -0.06
LETM1-203ENST00000505551 RWDD2AQ9UIY3 292 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 NFU1Q9UMS0 254 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 A0A087X0B3 334 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 A0A1W2PQC6 194 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 MACROD2A1Z1Q3 448 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 MATR3P43243 847 aaKnown RBP eCLIP14.65□□□□□ -0.06
LETM1-203ENST00000505551 BLMHQ13867 455 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 CCDC24Q8N4L8 307 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 CNKSR1Q969H4 720 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 OSBP2Q969R2 916 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 NOP53Q9NZM5 478 aaKnown RBP14.65□□□□□ -0.06
LETM1-203ENST00000505551 HYOU1Q9Y4L1 999 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 SPATA31A5Q5VU36 1347 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 SPATA31A7Q8IWB4 1347 aa14.65□□□□□ -0.06
LETM1-203ENST00000505551 A6NHS1 94 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 CIAO1O76071 339 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 GSTA1P08263 222 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 HPDP32754 393 aaPredicted RBP14.65□□□□□ -0.07
LETM1-203ENST00000505551 IL6STP40189 918 aaPredicted RBP14.65□□□□□ -0.07
LETM1-203ENST00000505551 AFMP43652 599 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 TSR1Q2NL82 804 aaKnown RBP14.65□□□□□ -0.07
LETM1-203ENST00000505551 TBC1D25Q3MII6 688 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 FKBP15Q5T1M5 1219 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 LRIG3Q6UXM1 1119 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 CSRNP2Q9H175 543 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.07
LETM1-203ENST00000505551 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.07
LETM1-203ENST00000505551 NIP7Q9Y221 180 aaKnown RBP eCLIP14.65□□□□□ -0.07
LETM1-203ENST00000505551 ITGB4P16144 1822 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 RTN3O95197 1032 aaPredicted RBP14.64□□□□□ -0.07
LETM1-203ENST00000505551 GLI1P08151 1106 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 LINGO3P0C6S8 592 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 ALADP13716 330 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 CASP1P29466 404 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 KIF5AQ12840 1032 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 PPP1R7Q15435 360 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 NTRK3Q16288 839 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 RILPL1Q5EBL4 403 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 MFN1Q8IWA4 741 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 WHAMMQ8TF30 809 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 YIPF3Q9GZM5 350 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 RANBP6O60518 1105 aaKnown RBP14.64□□□□□ -0.07
LETM1-203ENST00000505551 ATP2C2O75185 946 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 TACC1O75410 805 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 HSPA9P38646 679 aaKnown RBP14.64□□□□□ -0.07
LETM1-203ENST00000505551 GKAP1Q5VSY0 366 aaPredicted RBP14.64□□□□□ -0.07
LETM1-203ENST00000505551 CWF19L1Q69YN2 538 aaKnown RBP14.64□□□□□ -0.07
LETM1-203ENST00000505551 RALYLQ86SE5 291 aaKnown RBP14.64□□□□□ -0.07
LETM1-203ENST00000505551 MB21D1Q8N884 522 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 PLCB1Q9NQ66 1216 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
LETM1-203ENST00000505551 SMARCAL1Q9NZC9 954 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 SLC12A4Q9UP95 1085 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 CAPN6Q9Y6Q1 641 aa14.64□□□□□ -0.07
LETM1-203ENST00000505551 MYH10P35580 1976 aa14.63□□□□□ -0.07
LETM1-203ENST00000505551 MYH13Q9UKX3 1938 aa14.63□□□□□ -0.07
LETM1-203ENST00000505551 STK36Q9NRP7 1315 aa14.63□□□□□ -0.07
LETM1-203ENST00000505551 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
LETM1-203ENST00000505551 IFIT3O14879 490 aaKnown RBP14.63□□□□□ -0.07
LETM1-203ENST00000505551 COBLO75128 1261 aa14.63□□□□□ -0.07
LETM1-203ENST00000505551 SLC30A9Q6PML9 568 aa14.63□□□□□ -0.07
LETM1-203ENST00000505551 TAF1DQ9H5J8 278 aaPredicted RBP14.63□□□□□ -0.07
LETM1-203ENST00000505551 NHEJ1Q9H9Q4 299 aaPredicted RBP14.63□□□□□ -0.07
LETM1-203ENST00000505551 AATFQ9NY61 560 aaKnown RBP eCLIP14.63□□□□□ -0.07
LETM1-203ENST00000505551 ANGEL1Q9UNK9 670 aaKnown RBP14.63□□□□□ -0.07
LETM1-203ENST00000505551 PLAAQ9Y263 795 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms