RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 FOXD4L6Q3SYB3 417 aaPredicted RBP15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 ATL3Q6DD88 541 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 FAM173BQ6P4H8 233 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 FOXD4L3Q6VB84 417 aaPredicted RBP15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 NEK8Q86SG6 692 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 DPP9Q86TI2 863 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 FAM133AQ8N9E0 248 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 MPHOSPH6Q99547 160 aaKnown RBP15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 NAP1L4Q99733 375 aaKnown RBP15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 PXMP2Q9NR77 195 aa15.78■□□□□ 0.12
CYSTM1-202ENST00000504227 FKTNO75072 461 aa15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 PSMC4P43686 418 aa15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 ARHGAP4P98171 946 aa15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 GRB14Q14449 540 aa15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 XRRA1Q6P2D8 792 aa15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 TNPO1Q92973 898 aaKnown RBP15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 PURBQ96QR8 312 aaKnown RBP15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 IWS1Q96ST2 819 aa15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 WBP1LQ9NX94 342 aa15.77■□□□□ 0.12
CYSTM1-202ENST00000504227 RPTORQ8N122 1335 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 SOWAHBA6NEL2 793 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 COBLO75128 1261 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 CYP3A4P08684 503 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 EIF2AK2P19525 551 aaKnown RBP15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 ZNF76P36508 570 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 TOB1P50616 345 aaPredicted RBP15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 ARHGEF6Q15052 776 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 LETM2Q2VYF4 491 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 TTC38Q5R3I4 469 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 MORN1Q5T089 497 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 SOCS4Q8WXH5 440 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 NUDT12Q9BQG2 462 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 CFAP45Q9UL16 551 aa15.76■□□□□ 0.11
CYSTM1-202ENST00000504227 FRMPD4Q14CM0 1322 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 CCNT1O60563 726 aaKnown RBP15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 NR3C2P08235 984 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 MYCLP12524 364 aaPredicted RBP15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 GCFC2P16383 781 aaKnown RBP15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 NCLP19338 710 aaKnown RBP15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 CCND2P30279 289 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 UBXN2AP68543 259 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 DNM1Q05193 864 aaKnown RBP15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 MAP2K5Q13163 448 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 PGM5Q15124 567 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 ZNF792Q3KQV3 632 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 PCNX4Q63HM2 1172 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 ERO1AQ96HE7 468 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 TRIM47Q96LD4 638 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 PDCD2LQ9BRP1 358 aa15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 TFIP11Q9UBB9 837 aaKnown RBP15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 DIS3Q9Y2L1 958 aaKnown RBP15.75■□□□□ 0.11
CYSTM1-202ENST00000504227 LOC102724159A0A0B4J2E5 919 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 ASB14A6NK59 587 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 HOXD10P28358 340 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 RGS2P41220 211 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 ALDH5A1P51649 535 aaPredicted RBP15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 KRT85P78386 507 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 PDE4DQ08499 809 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 ORC2Q13416 577 aaPredicted RBP15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 PWP2Q15269 919 aaKnown RBP15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 ZNF174Q15697 407 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 PPP4R3AQ6IN85 833 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 MOXD1Q6UVY6 613 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 CRYGNQ8WXF5 182 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 ARHGAP39Q9C0H5 1083 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 GJD2Q9UKL4 321 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 CEP131Q9UPN4 1083 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 PCDHB6Q9Y5E3 794 aa15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 ZNFX1Q9P2E3 1918 aaKnown RBP15.74■□□□□ 0.11
CYSTM1-202ENST00000504227 RBBP6Q7Z6E9 1792 aaKnown RBP15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 CYP3A7-CYP3A51PA0A087WV96 503 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 BMP15O95972 392 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 GNRH1P01148 92 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 CYP3A7P24462 503 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 CTGFP29279 349 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 CIITAP33076 1130 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 MCM7P33993 719 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 CEBPZQ03701 1054 aaKnown RBP15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 NBR1Q14596 966 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 STXBP2Q15833 593 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 ANO1Q5XXA6 986 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 ZNF467Q7Z7K2 595 aaPredicted RBP15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 VSIG10LQ86VR7 867 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 IL31RAQ8NI17 732 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 CD99L2Q8TCZ2 262 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 ZNF296Q8WUU4 475 aaPredicted RBP15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 USP6NLQ92738 828 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 USP28Q96RU2 1077 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 DDX25Q9UHL0 483 aaKnown RBP15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 CLIC4Q9Y696 253 aa15.73■□□□□ 0.11
CYSTM1-202ENST00000504227 DOCK3Q8IZD9 2030 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 EDIL3O43854 480 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 STAM2O75886 525 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 TDP2O95551 362 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 HOXC6P09630 235 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 EDNRBP24530 442 aa15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 SF3A1Q15459 793 aaKnown RBP15.72■□□□□ 0.11
CYSTM1-202ENST00000504227 CEP55Q53EZ4 464 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms