RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 HEATR3Q7Z4Q2 680 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 FKBP14Q9NWM8 211 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 ATXN10Q9UBB4 475 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 WBP11Q9Y2W2 641 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 PLEKHG2Q9H7P9 1386 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 MX2P20592 715 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 HMGB2P26583 209 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 KRT2P35908 639 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 HADHAP40939 763 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 PEX5P50542 639 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 PTPN5P54829 565 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 C6orf183Q5T699 404 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 ITPRIPL1Q6GPH6 555 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 MMTAG2Q9BU76 263 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 VPS16Q9H269 839 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 ST7Q9NRC1 585 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 HOMER2Q9NSB8 354 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 STIM2Q9P246 746 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 AFF4Q9UHB7 1163 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 SPG7Q9UQ90 795 aa6.8□□□□□ -1.32
CLCN3-204ENST00000504131 MRPL11Q9Y3B7 192 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 EIF4G3O43432 1585 aaKnown RBP6.8□□□□□ -1.32
CLCN3-204ENST00000504131 KRT6AP02538 564 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 KRT6BP04259 564 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 KRT6CP48668 564 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 P3H4Q92791 437 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 UROC1Q96N76 676 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 TRIM39Q9HCM9 518 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ARHGEF38Q9NXL2 777 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 LCMT1Q9UIC8 334 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC151A5D8V7 595 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 GNB5O14775 395 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ANGPT2O15123 496 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 KATNA1O75449 491 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 LMOD1P29536 600 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 PPFIA1Q13136 1202 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 PRR16Q569H4 304 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 BARD1Q99728 777 aaKnown RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ZCWPW1Q9H0M4 648 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 EME2A4GXA9 379 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 DHX9Q08211 1270 aaKnown RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 SPATA1Q5VX52 437 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ANO5Q75V66 913 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 UBL4BQ8N7F7 174 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 BORCS6Q96GS4 357 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 MTMR12Q9C0I1 747 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 COG4Q9H9E3 785 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ACTR5Q9H9F9 607 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 SENP2Q9HC62 589 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 EPB41L4AQ9HCS5 686 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 DMAP1Q9NPF5 467 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 CTTNBP2NLQ9P2B4 639 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ANGPTL2Q9UKU9 493 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC7Q96M83 1385 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 GNAT3A8MTJ3 354 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 RAD51BO15315 384 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ACTN4O43707 911 aaKnown RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 DKC1O60832 514 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 RPL17P18621 184 aaKnown RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 RUNX1T1Q06455 604 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 PDE4BQ07343 736 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 EFR3AQ14156 821 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 MAJINQ3KP22 176 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ALFQ53S48 1182 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ARID3BQ8IVW6 561 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 AGAP3Q96P47 875 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 FHOD3Q2V2M9 1422 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ZBBXA8MT70 800 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ADCY3O60266 1144 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 HSF2BPO75031 334 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ZBED4O75132 1171 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 MYCLP12524 364 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 SKIP12755 728 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 HSPA6P17066 643 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 FKBP5Q13451 457 aaPredicted RBP6.79□□□□□ -1.32
CLCN3-204ENST00000504131 NFE2L1Q14494 772 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ZYG11AQ6WRX3 759 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 CACNA2D4Q7Z3S7 1137 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 DDHD1Q8NEL9 900 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 KCTD4Q8WVF5 259 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 ANKRD7Q92527 254 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 B3GALT6Q96L58 329 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 CCDC42Q96M95 316 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 SLC8A2Q9UPR5 921 aa6.79□□□□□ -1.32
CLCN3-204ENST00000504131 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 PRSS47A8MTI9 375 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 FAM25EA8MYX2 175 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 BHMG1C9JSJ3 638 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ZNF76P36508 570 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 AKR1D1P51857 326 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 VBP1P61758 197 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 UGP2Q16851 508 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 PPP4R3AQ6IN85 833 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 ARMC6Q6NXE6 501 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 MFSD6Q6ZSS7 791 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 CPLX4Q7Z7G2 160 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 OR8H2Q8N162 312 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 C10orf53Q8N6V4 93 aa6.78□□□□□ -1.32
CLCN3-204ENST00000504131 RNPC3Q96LT9 517 aaKnown RBP6.78□□□□□ -1.32
CLCN3-204ENST00000504131 PCDH12Q9NPG4 1184 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms