RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ANKRD45Q5TZF3 282 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 TTBK2Q6IQ55 1244 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 OTOP2Q7RTS6 562 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 IQCA1Q86XH1 822 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 MCF2L2Q86YR7 1114 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 OR6J1Q8NGC5 347 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 NSUN6Q8TEA1 469 aaKnown RBP7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 PRDM12Q9H4Q4 367 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 INCENPQ9NQS7 918 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 YBX2Q9Y2T7 364 aaKnown RBP7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 ARIH1Q9Y4X5 557 aaPredicted RBP7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 MYH7BA7E2Y1 1941 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 UMODL1Q5DID0 1318 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 COL4A6Q14031 1691 aa7.16□□□□□ -1.26
LSM3P4-201ENST00000502948 SIP14410 1827 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 TET1Q8NFU7 2136 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 KIF28PB7ZC32 967 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 ZNF213O14771 459 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 EFCAB14O75071 495 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 CXCL10P02778 98 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 TXNP10599 105 aaKnown RBP7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 ATP2A2P16615 1042 aaKnown RBP7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 SDSP20132 328 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 CASTP20810 708 aaKnown RBP7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 SLC16A2P36021 539 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 CCL23P55773 120 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 PSMC6P62333 389 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 TRAF1Q13077 416 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 NBPF20Q3BBV1 942 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 TMEM67Q5HYA8 995 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 TMEM63BQ5T3F8 832 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 PPP2R2DQ66LE6 453 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 KCNV1Q6PIU1 500 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 SLC30A10Q6XR72 485 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 EEPD1Q7L9B9 569 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 ZNF589Q86UQ0 364 aaPredicted RBP7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 RETREG2Q8NC44 543 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 FAM227BQ96M60 508 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 DSCC1Q9BVC3 393 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 KATNAL1Q9BW62 490 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 NKX2-4Q9H2Z4 354 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 CNNM2Q9H8M5 875 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 TRMT13Q9NUP7 481 aaKnown RBP7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 ISY1Q9ULR0 285 aaKnown RBP7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 COG5Q9UP83 839 aa7.15□□□□□ -1.26
LSM3P4-201ENST00000502948 NCOR1O75376 2440 aa7.15□□□□□ -1.27
LSM3P4-201ENST00000502948 TTC28Q96AY4 2481 aa7.15□□□□□ -1.27
LSM3P4-201ENST00000502948 TRANK1O15050 2925 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 CHD7Q9P2D1 2997 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 HAS3O00219 553 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 PPFIA4O75335 1185 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 EIF3JO75822 258 aaKnown RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 GH1P01241 217 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 TGFB3P10600 412 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 CALML3P27482 149 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 ARHGAP1Q07960 439 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 NMIQ13287 307 aaPredicted RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 LAMC2Q13753 1193 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 STXBP2Q15833 593 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 STOX1Q6ZVD7 989 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 RASGRP2Q7LDG7 609 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 TBC1D10CQ8IV04 446 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 SYTL5Q8TDW5 730 aaPredicted RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 MTMR8Q96EF0 704 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 SCLYQ96I15 445 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 PURBQ96QR8 312 aaKnown RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 CTAGE1Q96RT6 745 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 ZSCAN10Q96SZ4 725 aaPredicted RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 KRT23Q9C075 422 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 RWDD1Q9H446 243 aaPredicted RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 GPCPD1Q9NPB8 672 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 TOMM22Q9NS69 142 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 CTNNA3Q9UI47 895 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 DDX41Q9UJV9 622 aaKnown RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 MRPL11Q9Y3B7 192 aaKnown RBP7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 MTCH2Q9Y6C9 303 aa7.14□□□□□ -1.27
LSM3P4-201ENST00000502948 NEDD4P46934 1319 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 FRMPD2Q68DX3 1309 aaPredicted RBP7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 ABHD14A-ACY1A0A1B0GW23 586 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 GTPBP6O43824 516 aaPredicted RBP7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 STAM2O75886 525 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 ARIH2O95376 493 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 F2P00734 622 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 MMP3P08254 477 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 MYL3P08590 195 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 CYP2C9P11712 490 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 BMP1P13497 986 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 SELPP16109 830 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 HOXC8P31273 242 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 HSD17B4P51659 736 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 SNAP25P60880 206 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 NUCB1Q02818 461 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 TAP1Q03518 808 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 CDC37Q16543 378 aaPredicted RBP7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 PTGISQ16647 500 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 DGKDQ16760 1214 aa7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 IMMTQ16891 758 aaKnown RBP7.13□□□□□ -1.27
LSM3P4-201ENST00000502948 RRP12Q5JTH9 1297 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms