RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 CTCFLQ8NI51 663 aaPredicted RBP28.77■■■□□ 2.2
TRIO-204ENST00000502816 SCFD2Q8WU76 684 aa28.77■■■□□ 2.2
TRIO-204ENST00000502816 TRIM43Q96BQ3 446 aaPredicted RBP28.77■■■□□ 2.2
TRIO-204ENST00000502816 NEK1Q96PY6 1258 aa28.77■■■□□ 2.2
TRIO-204ENST00000502816 RMDN3Q96TC7 470 aa28.77■■■□□ 2.2
TRIO-204ENST00000502816 MROH7Q68CQ1 1323 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 A0A0U1RQG5 324 aaPredicted RBP28.76■■■□□ 2.19
TRIO-204ENST00000502816 CCDC69A6NI79 296 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 KIAA0355O15063 1070 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 CLTBP09497 229 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 GNAQP50148 359 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 FAAP100Q0VG06 881 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 TDHQ8IZJ6 230 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 SEZ6LQ9BYH1 1024 aa28.76■■■□□ 2.19
TRIO-204ENST00000502816 UBE2OQ9C0C9 1292 aaKnown RBP28.76■■■□□ 2.19
TRIO-204ENST00000502816 ARVCFO00192 962 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 ZEB2O60315 1214 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 CFBP00751 764 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 PTGS1P23219 599 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 MDM2Q00987 491 aaPredicted RBP28.75■■■□□ 2.19
TRIO-204ENST00000502816 KRT32Q14532 448 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 SH3RF1Q7Z6J0 888 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 HOMER1Q86YM7 354 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 LBHD1Q9BQE6 289 aaPredicted RBP28.75■■■□□ 2.19
TRIO-204ENST00000502816 MYL10Q9BUA6 226 aa28.75■■■□□ 2.19
TRIO-204ENST00000502816 STXBP2Q15833 593 aa28.74■■■□□ 2.19
TRIO-204ENST00000502816 LRIT3Q3SXY7 679 aa28.74■■■□□ 2.19
TRIO-204ENST00000502816 CCDC62Q6P9F0 684 aa28.74■■■□□ 2.19
TRIO-204ENST00000502816 DHX32Q7L7V1 743 aaKnown RBP28.74■■■□□ 2.19
TRIO-204ENST00000502816 PXMP2Q9NR77 195 aa28.74■■■□□ 2.19
TRIO-204ENST00000502816 DCDC2CA8MYV0 355 aa28.73■■■□□ 2.19
TRIO-204ENST00000502816 ADCK5Q3MIX3 580 aa28.73■■■□□ 2.19
TRIO-204ENST00000502816 NFXL1Q6ZNB6 911 aa28.73■■■□□ 2.19
TRIO-204ENST00000502816 PPP4R2Q9NY27 417 aa28.73■■■□□ 2.19
TRIO-204ENST00000502816 PCDH10Q9P2E7 1040 aa28.73■■■□□ 2.19
TRIO-204ENST00000502816 EPB41L2O43491 1005 aaKnown RBP28.72■■■□□ 2.19
TRIO-204ENST00000502816 PQBP1O60828 265 aaKnown RBP28.72■■■□□ 2.19
TRIO-204ENST00000502816 TTLL4Q14679 1199 aa28.72■■■□□ 2.19
TRIO-204ENST00000502816 PPP2R5BQ15173 497 aa28.72■■■□□ 2.19
TRIO-204ENST00000502816 ARHGEF16Q5VV41 709 aa28.72■■■□□ 2.19
TRIO-204ENST00000502816 CXCL17Q6UXB2 119 aa28.72■■■□□ 2.19
TRIO-204ENST00000502816 SRBD1Q8N5C6 995 aaKnown RBP28.72■■■□□ 2.19
TRIO-204ENST00000502816 SLC12A7Q9Y666 1083 aa28.72■■■□□ 2.19
TRIO-204ENST00000502816 EIF3JO75822 258 aaKnown RBP28.71■■■□□ 2.19
TRIO-204ENST00000502816 NR3C2P08235 984 aa28.71■■■□□ 2.19
TRIO-204ENST00000502816 HMGB1P09429 215 aaKnown RBP28.71■■■□□ 2.19
TRIO-204ENST00000502816 HSPA4P34932 840 aa28.71■■■□□ 2.19
TRIO-204ENST00000502816 FANCBQ8NB91 859 aa28.71■■■□□ 2.19
TRIO-204ENST00000502816 LRRC2Q9BYS8 371 aa28.71■■■□□ 2.19
TRIO-204ENST00000502816 PRDM5Q9NQX1 630 aaPredicted RBP28.71■■■□□ 2.19
TRIO-204ENST00000502816 TBX21Q9UL17 535 aa28.71■■■□□ 2.19
TRIO-204ENST00000502816 GRIN2DO15399 1336 aa28.7■■■□□ 2.19
TRIO-204ENST00000502816 A6NJR5 290 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 GCOM1H8Y6P7 765 aaPredicted RBP28.7■■■□□ 2.18
TRIO-204ENST00000502816 ARIH2O95376 493 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 POLR2MP0CAP2 368 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 TXNP10599 105 aaKnown RBP28.7■■■□□ 2.18
TRIO-204ENST00000502816 ITGB8P26012 769 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 CPT1AP50416 773 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 FAM126BQ8IXS8 530 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 BADQ92934 168 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 RRP36Q96EU6 259 aaKnown RBP28.7■■■□□ 2.18
TRIO-204ENST00000502816 PDCD2LQ9BRP1 358 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 POLR3EQ9NVU0 708 aa28.7■■■□□ 2.18
TRIO-204ENST00000502816 PLEKHA8P1O95397 391 aa28.69■■■□□ 2.18
TRIO-204ENST00000502816 CD4P01730 458 aa28.69■■■□□ 2.18
TRIO-204ENST00000502816 EIF2AK2P19525 551 aaKnown RBP28.69■■■□□ 2.18
TRIO-204ENST00000502816 VSIG10LQ86VR7 867 aa28.69■■■□□ 2.18
TRIO-204ENST00000502816 OR6J1Q8NGC5 347 aa28.69■■■□□ 2.18
TRIO-204ENST00000502816 VTI1AQ96AJ9 217 aa28.69■■■□□ 2.18
TRIO-204ENST00000502816 TMEM39AQ9NV64 488 aa28.69■■■□□ 2.18
TRIO-204ENST00000502816 SCN10AQ9Y5Y9 1956 aa28.68■■■□□ 2.18
TRIO-204ENST00000502816 PURAQ00577 322 aaKnown RBP28.68■■■□□ 2.18
TRIO-204ENST00000502816 ITGA7Q13683 1181 aa28.68■■■□□ 2.18
TRIO-204ENST00000502816 APOA5Q6Q788 366 aa28.68■■■□□ 2.18
TRIO-204ENST00000502816 FRMPD4Q14CM0 1322 aa28.68■■■□□ 2.18
TRIO-204ENST00000502816 SOX1O00570 391 aaPredicted RBP28.67■■■□□ 2.18
TRIO-204ENST00000502816 KPNA6O60684 536 aa28.67■■■□□ 2.18
TRIO-204ENST00000502816 REC8O95072 547 aa28.67■■■□□ 2.18
TRIO-204ENST00000502816 HOXA13P31271 388 aaPredicted RBP28.67■■■□□ 2.18
TRIO-204ENST00000502816 PGM5Q15124 567 aa28.67■■■□□ 2.18
TRIO-204ENST00000502816 GPR153Q6NV75 609 aa28.67■■■□□ 2.18
TRIO-204ENST00000502816 TMTC3Q6ZXV5 915 aa28.67■■■□□ 2.18
TRIO-204ENST00000502816 FBXL16Q8N461 479 aa28.67■■■□□ 2.18
TRIO-204ENST00000502816 COPS5Q92905 334 aa28.67■■■□□ 2.18
TRIO-204ENST00000502816 DDX41Q9UJV9 622 aaKnown RBP28.67■■■□□ 2.18
TRIO-204ENST00000502816 PIK3CDO00329 1044 aa28.66■■■□□ 2.18
TRIO-204ENST00000502816 RXRAP19793 462 aa28.66■■■□□ 2.18
TRIO-204ENST00000502816 RCAN1P53805 252 aa28.66■■■□□ 2.18
TRIO-204ENST00000502816 BRDTQ58F21 947 aaPredicted RBP28.66■■■□□ 2.18
TRIO-204ENST00000502816 EMID1Q96A84 441 aaPredicted RBP28.66■■■□□ 2.18
TRIO-204ENST00000502816 RGS20O76081 388 aa28.65■■■□□ 2.18
TRIO-204ENST00000502816 TIMP1P01033 207 aa28.65■■■□□ 2.18
TRIO-204ENST00000502816 RAG1P15918 1043 aa28.65■■■□□ 2.18
TRIO-204ENST00000502816 SYNE3Q6ZMZ3 975 aa28.65■■■□□ 2.18
TRIO-204ENST00000502816 SEPT14Q6ZU15 432 aa28.65■■■□□ 2.18
TRIO-204ENST00000502816 RBM28Q9NW13 759 aaKnown RBP28.65■■■□□ 2.18
TRIO-204ENST00000502816 SEC63Q9UGP8 760 aaKnown RBP28.65■■■□□ 2.18
TRIO-204ENST00000502816 BRPF3Q9ULD4 1205 aa28.65■■■□□ 2.18
TRIO-204ENST00000502816 SNX14Q9Y5W7 946 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms