RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PXMP2Q9NR77 195 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 BRCA2P51587 3418 aa28.9■■■□□ 2.22
LSM6-202ENST00000502781 ESYT2A0FGR8 921 aa28.89■■■□□ 2.22
LSM6-202ENST00000502781 DEXIO95424 95 aa28.89■■■□□ 2.22
LSM6-202ENST00000502781 SGPL1O95470 568 aa28.89■■■□□ 2.22
LSM6-202ENST00000502781 IWS1Q96ST2 819 aa28.89■■■□□ 2.22
LSM6-202ENST00000502781 RIC8AQ9NPQ8 531 aa28.89■■■□□ 2.22
LSM6-202ENST00000502781 DDX20Q9UHI6 824 aaKnown RBP28.89■■■□□ 2.22
LSM6-202ENST00000502781 STK36Q9NRP7 1315 aa28.89■■■□□ 2.22
LSM6-202ENST00000502781 MCM3APO60318 1980 aa28.89■■■□□ 2.22
LSM6-202ENST00000502781 SOX10P56693 466 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 CUL5Q93034 780 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 SHISA4Q96DD7 197 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 MPHOSPH6Q99547 160 aaKnown RBP28.88■■■□□ 2.21
LSM6-202ENST00000502781 SH2B1Q9NRF2 756 aaPredicted RBP28.88■■■□□ 2.21
LSM6-202ENST00000502781 FRMPD4Q14CM0 1322 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 B4DLN1 442 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 MSCO60682 206 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 CD2BP2O95400 341 aaKnown RBP28.88■■■□□ 2.21
LSM6-202ENST00000502781 CAPN2P17655 700 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 MRPL12P52815 198 aaKnown RBP28.88■■■□□ 2.21
LSM6-202ENST00000502781 FCHSD1Q86WN1 690 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 SMARCC2Q8TAQ2 1214 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 PDCD2LQ9BRP1 358 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 ZMYND12Q9H0C1 365 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 VTA1Q9NP79 307 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 SH3GLB2Q9NR46 395 aa28.88■■■□□ 2.21
LSM6-202ENST00000502781 SMCO2A6NFE2 343 aa28.87■■■□□ 2.21
LSM6-202ENST00000502781 CNGA1P29973 690 aa28.87■■■□□ 2.21
LSM6-202ENST00000502781 ARHGEF16Q5VV41 709 aa28.87■■■□□ 2.21
LSM6-202ENST00000502781 NSUN7Q8NE18 718 aaKnown RBP28.87■■■□□ 2.21
LSM6-202ENST00000502781 CCDC12Q8WUD4 166 aaPredicted RBP28.87■■■□□ 2.21
LSM6-202ENST00000502781 GLT8D2Q9H1C3 349 aa28.87■■■□□ 2.21
LSM6-202ENST00000502781 ZHX1Q9UKY1 873 aaPredicted RBP28.87■■■□□ 2.21
LSM6-202ENST00000502781 NR3C2P08235 984 aa28.86■■■□□ 2.21
LSM6-202ENST00000502781 AKR1A1P14550 325 aa28.86■■■□□ 2.21
LSM6-202ENST00000502781 EIF2AK2P19525 551 aaKnown RBP28.86■■■□□ 2.21
LSM6-202ENST00000502781 PDE4DQ08499 809 aa28.86■■■□□ 2.21
LSM6-202ENST00000502781 TAPT1Q6NXT6 567 aa28.86■■■□□ 2.21
LSM6-202ENST00000502781 OGDHLQ9ULD0 1010 aa28.86■■■□□ 2.21
LSM6-202ENST00000502781 LRRC37A2A6NM11 1700 aa28.85■■■□□ 2.21
LSM6-202ENST00000502781 FDPSP14324 419 aaKnown RBP28.85■■■□□ 2.21
LSM6-202ENST00000502781 EN2P19622 333 aaPredicted RBP28.85■■■□□ 2.21
LSM6-202ENST00000502781 ADCY7P51828 1080 aa28.85■■■□□ 2.21
LSM6-202ENST00000502781 CCDC144BQ3MJ40 725 aa28.85■■■□□ 2.21
LSM6-202ENST00000502781 FBXO16Q8IX29 292 aaPredicted RBP28.85■■■□□ 2.21
LSM6-202ENST00000502781 FAM177A1Q8N128 213 aaPredicted RBP28.85■■■□□ 2.21
LSM6-202ENST00000502781 FAM184BQ9ULE4 1060 aa28.85■■■□□ 2.21
LSM6-202ENST00000502781 CLK2P49760 499 aaKnown RBP28.84■■■□□ 2.21
LSM6-202ENST00000502781 PGM5Q15124 567 aa28.84■■■□□ 2.21
LSM6-202ENST00000502781 UBE2SQ16763 222 aa28.84■■■□□ 2.21
LSM6-202ENST00000502781 EEPD1Q7L9B9 569 aa28.84■■■□□ 2.21
LSM6-202ENST00000502781 CCDC148Q8NFR7 591 aa28.84■■■□□ 2.21
LSM6-202ENST00000502781 VPS54Q9P1Q0 977 aa28.84■■■□□ 2.21
LSM6-202ENST00000502781 RBM47A0AV96 593 aaKnown RBP28.83■■■□□ 2.21
LSM6-202ENST00000502781 ADCY6O43306 1168 aa28.83■■■□□ 2.21
LSM6-202ENST00000502781 MCM2P49736 904 aa28.83■■■□□ 2.21
LSM6-202ENST00000502781 VSIG10LQ86VR7 867 aa28.83■■■□□ 2.21
LSM6-202ENST00000502781 IL31RAQ8NI17 732 aa28.83■■■□□ 2.21
LSM6-202ENST00000502781 AIFM3Q96NN9 605 aa28.83■■■□□ 2.21
LSM6-202ENST00000502781 PDGFCQ9NRA1 345 aa28.83■■■□□ 2.21
LSM6-202ENST00000502781 ORC3Q9UBD5 711 aaPredicted RBP28.83■■■□□ 2.21
LSM6-202ENST00000502781 DTNBO60941 627 aa28.82■■■□□ 2.2
LSM6-202ENST00000502781 STXBP2Q15833 593 aa28.82■■■□□ 2.2
LSM6-202ENST00000502781 CCDC83Q8IWF9 413 aa28.82■■■□□ 2.2
LSM6-202ENST00000502781 C6orf50Q9HD87 102 aa28.82■■■□□ 2.2
LSM6-202ENST00000502781 LLPHQ9BRT6 129 aaKnown RBP28.81■■■□□ 2.2
LSM6-202ENST00000502781 JAK2O60674 1132 aa28.8■■■□□ 2.2
LSM6-202ENST00000502781 EIF3JO75822 258 aaKnown RBP28.8■■■□□ 2.2
LSM6-202ENST00000502781 FOSP01100 380 aaPredicted RBP28.8■■■□□ 2.2
LSM6-202ENST00000502781 GNA11P29992 359 aa28.8■■■□□ 2.2
LSM6-202ENST00000502781 ADCYAP1R1P41586 468 aa28.8■■■□□ 2.2
LSM6-202ENST00000502781 IQSEC1Q6DN90 963 aa28.8■■■□□ 2.2
LSM6-202ENST00000502781 TMX3Q96JJ7 454 aa28.8■■■□□ 2.2
LSM6-202ENST00000502781 PCDHA6Q9UN73 950 aa28.8■■■□□ 2.2
LSM6-202ENST00000502781 PCDHA8Q9Y5H6 950 aa28.8■■■□□ 2.2
LSM6-202ENST00000502781 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.79■■■□□ 2.2
LSM6-202ENST00000502781 SPDYE3A6NKU9 549 aa28.79■■■□□ 2.2
LSM6-202ENST00000502781 ADAMTS3O15072 1205 aa28.79■■■□□ 2.2
LSM6-202ENST00000502781 DUSP11O75319 330 aaKnown RBP28.79■■■□□ 2.2
LSM6-202ENST00000502781 RGS20O76081 388 aa28.79■■■□□ 2.2
LSM6-202ENST00000502781 TFRCP02786 760 aaKnown RBP28.79■■■□□ 2.2
LSM6-202ENST00000502781 RARBP10826 455 aa28.79■■■□□ 2.2
LSM6-202ENST00000502781 MNX1P50219 401 aaPredicted RBP28.79■■■□□ 2.2
LSM6-202ENST00000502781 AP3B2Q13367 1082 aa28.79■■■□□ 2.2
LSM6-202ENST00000502781 ANO1Q5XXA6 986 aa28.79■■■□□ 2.2
LSM6-202ENST00000502781 ANKLE1Q8NAG6 615 aa28.79■■■□□ 2.2
LSM6-202ENST00000502781 GNEQ9Y223 722 aaKnown RBP28.79■■■□□ 2.2
LSM6-202ENST00000502781 CAPN15O75808 1086 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 CCND2P30279 289 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 RGS19P49795 217 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 TNFAIP2Q03169 654 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 NPY5RQ15761 445 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 PCNX4Q63HM2 1172 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 XRRA1Q6P2D8 792 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 UBE2Q1Q7Z7E8 422 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 WASF1Q92558 559 aa28.78■■■□□ 2.2
LSM6-202ENST00000502781 LENG1Q96BZ8 264 aaPredicted RBP28.78■■■□□ 2.2
LSM6-202ENST00000502781 MYCLP12524 364 aaPredicted RBP28.77■■■□□ 2.2
LSM6-202ENST00000502781 SMPD1P17405 629 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms