RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 RAD21O60216 631 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 TACC1O75410 805 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 ZSCAN20P17040 1043 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 RXRBP28702 533 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 KRT9P35527 623 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 ZBED6P86452 979 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 ICA1Q05084 483 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CUL4BQ13620 913 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CLUL1Q15846 466 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 E2F4Q16254 413 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC93Q567U6 631 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 MCF2L2Q86YR7 1114 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 GMCL1P1Q8NEA9 526 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 NEK9Q8TD19 979 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC43Q96MW1 224 aaKnown RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 NAPGQ99747 312 aaPredicted RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 L2HGDHQ9H9P8 463 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 IRS2Q9Y4H2 1338 aa8.23□□□□□ -1.09
PDGFC-203ENST00000502773 MYH14Q7Z406 1995 aaKnown RBP8.23□□□□□ -1.09
PDGFC-203ENST00000502773 PPP1R3GB7ZBB8 358 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CETN3O15182 167 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 RHBDL3P58872 404 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CDK17Q00537 523 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 BRD3Q15059 726 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 MAN2A1Q16706 1144 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 KMT5BQ4FZB7 885 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 C10orf76Q5T2E6 689 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 NEK11Q8NG66 645 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 RABGGTAQ92696 567 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC42Q96M95 316 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 MAP3K20Q9NYL2 800 aaKnown RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 POLLQ9UGP5 575 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 MYO6Q9UM54 1294 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 BZW2Q9Y6E2 419 aaKnown RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 PITPNM2Q9BZ72 1349 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CTAGE15A4D2H0 777 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 MMP10P09238 476 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CTAGE8P0CG41 777 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 SNHG28P0DPA3 235 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 IDEP14735 1019 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 KLRK1P26718 216 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 STX17P56962 302 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 FKBP3Q00688 224 aaKnown RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 ALCAMQ13740 583 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 KARSQ15046 597 aaKnown RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 DLGAP5Q15398 846 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 TTC31Q49AM3 519 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 HSP90B2PQ58FF3 399 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 USP37Q86T82 979 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CTAGE6Q86UF2 777 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CTAGE4Q8IX94 777 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 RUBCNQ92622 972 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 GMCL1Q96IK5 515 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 CPSF2Q9P2I0 782 aaKnown RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 BIN2Q9UBW5 565 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 hCG_1642624A0A1W2PR95 340 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 NMT2O60551 498 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 ATP1A3P13637 1013 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 KCNQ4P56696 695 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 KRT31Q15323 416 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 USP17L2Q6R6M4 530 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 TXNRD3Q86VQ6 643 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 MB21D1Q8N884 522 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 LMBR1Q8WVP7 490 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 IWS1Q96ST2 819 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 WDR11Q9BZH6 1224 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 TANGO6Q9C0B7 1094 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 RNF14Q9UBS8 474 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 JAG2Q9Y219 1238 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 PCDHA1Q9Y5I3 950 aa8.22□□□□□ -1.09
PDGFC-203ENST00000502773 COL1A1P02452 1464 aaPredicted RBP8.22□□□□□ -1.09
PDGFC-203ENST00000502773 BMP3P12645 472 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 PLCG1P19174 1290 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 TECP42680 631 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 ZNF662Q6ZS27 426 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 STAG2Q8N3U4 1231 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC24Q8N4L8 307 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 ANKRD7Q92527 254 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 TUBGCP2Q9BSJ2 902 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 ARFGAP3Q9NP61 516 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 KCND2Q9NZV8 630 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 V9GYY5 206 aaPredicted RBP8.21□□□□□ -1.09
PDGFC-203ENST00000502773 MYH13Q9UKX3 1938 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 PAFAH1B1P43034 410 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 GABPAQ06546 454 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 GABPB1Q06547 395 aaPredicted RBP8.21□□□□□ -1.09
PDGFC-203ENST00000502773 BIRC2Q13490 618 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 RPAINQ86UA6 219 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 RAD54LQ92698 747 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 TRIM9Q9C026 710 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 SAMSN1Q9NSI8 373 aaKnown RBP8.21□□□□□ -1.09
PDGFC-203ENST00000502773 CACNA1SQ13698 1873 aa8.21□□□□□ -1.09
PDGFC-203ENST00000502773 USP17L5A8MUK1 530 aa8.21□□□□□ -1.1
PDGFC-203ENST00000502773 F8W031 263 aaPredicted RBP8.21□□□□□ -1.1
PDGFC-203ENST00000502773 PRR29P0C7W0 189 aa8.21□□□□□ -1.1
PDGFC-203ENST00000502773 HSPA1LP34931 641 aa8.21□□□□□ -1.1
PDGFC-203ENST00000502773 SYDE2Q5VT97 1194 aa8.21□□□□□ -1.1
PDGFC-203ENST00000502773 E4F1Q66K89 784 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms