RNA–Protein interactions for RNA: ENST00000499045.2

CHFR-206, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 505 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-206	ENST00000499045	MYCN	P04198	464 aa	Predicted RBP	29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	POLR2M	P0CAP2	368 aa		29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	CST5	P28325	142 aa	Predicted RBP	29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	HOXA13	P31271	388 aa	Predicted RBP	29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	PPP2R5B	Q15173	497 aa		29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	TMEM63B	Q5T3F8	832 aa		29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	IL17RA	Q96F46	866 aa		29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	UPF3B	Q9BZI7	483 aa	Known RBP	29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	PXMP2	Q9NR77	195 aa		29.19	■■■□□ 2.26
CHFR-206	ENST00000499045	CTAGE5	O15320	804 aa		29.18	■■■□□ 2.26
CHFR-206	ENST00000499045	EVI5	O60447	810 aa		29.18	■■■□□ 2.26
CHFR-206	ENST00000499045	ANAPC15	P60006	121 aa		29.18	■■■□□ 2.26
CHFR-206	ENST00000499045	IRX5	P78411	483 aa	Predicted RBP	29.18	■■■□□ 2.26
CHFR-206	ENST00000499045	TOB2	Q14106	344 aa	Predicted RBP	29.18	■■■□□ 2.26
CHFR-206	ENST00000499045	TSEN34	Q9BSV6	310 aa	Known RBP	29.18	■■■□□ 2.26
CHFR-206	ENST00000499045	METAP2	P50579	478 aa	Known RBP eCLIP	29.17	■■■□□ 2.26
CHFR-206	ENST00000499045	LRRC26	Q2I0M4	334 aa		29.17	■■■□□ 2.26
CHFR-206	ENST00000499045	ARHGEF16	Q5VV41	709 aa		29.17	■■■□□ 2.26
CHFR-206	ENST00000499045	NAP1L2	Q9ULW6	460 aa	Predicted RBP	29.17	■■■□□ 2.26
CHFR-206	ENST00000499045		Q9Y3F1	56 aa		29.17	■■■□□ 2.26
CHFR-206	ENST00000499045	EIF2AK2	P19525	551 aa	Known RBP	29.16	■■■□□ 2.26
CHFR-206	ENST00000499045	PTGS1	P23219	599 aa		29.16	■■■□□ 2.26
CHFR-206	ENST00000499045	ADD1	P35611	737 aa	Known RBP	29.16	■■■□□ 2.26
CHFR-206	ENST00000499045	DUSP28	Q4G0W2	176 aa		29.16	■■■□□ 2.26
CHFR-206	ENST00000499045	WDR11	Q9BZH6	1224 aa		29.16	■■■□□ 2.26
CHFR-206	ENST00000499045	NR2E3	Q9Y5X4	410 aa		29.16	■■■□□ 2.26
CHFR-206	ENST00000499045	CCDC196	A0A1B0GTZ2	297 aa		29.15	■■■□□ 2.26
CHFR-206	ENST00000499045		H0YGN5	161 aa		29.15	■■■□□ 2.26
CHFR-206	ENST00000499045	NR3C2	P08235	984 aa		29.15	■■■□□ 2.26
CHFR-206	ENST00000499045	C6orf222	P0C671	652 aa	Predicted RBP	29.15	■■■□□ 2.26
CHFR-206	ENST00000499045	TLK2	Q86UE8	772 aa		29.15	■■■□□ 2.26
CHFR-206	ENST00000499045	PDCD2L	Q9BRP1	358 aa		29.15	■■■□□ 2.26
CHFR-206	ENST00000499045	SPC25	Q9HBM1	224 aa		29.15	■■■□□ 2.26
CHFR-206	ENST00000499045	PIK3CD	O00329	1044 aa		29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	PDIA3	P30101	505 aa	Known RBP	29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	SNX17	Q15036	470 aa		29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	STXBP2	Q15833	593 aa		29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	KCNA10	Q16322	511 aa		29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	SLC39A5	Q6ZMH5	540 aa		29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	NOL8	Q76FK4	1167 aa	Known RBP	29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	FERMT2	Q96AC1	680 aa		29.14	■■■□□ 2.26
CHFR-206	ENST00000499045		V9GY48	417 aa	Predicted RBP	29.14	■■■□□ 2.26
CHFR-206	ENST00000499045	MOXD2P	A6NHM9	499 aa		29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	MEIS2	O14770	477 aa		29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	ACLY	P53396	1101 aa		29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	ATN1	P54259	1190 aa	Predicted RBP	29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	C8orf34	Q49A92	452 aa		29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	SCFD2	Q8WU76	684 aa		29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	KIAA1217	Q5T5P2	1943 aa		29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	FRMPD4	Q14CM0	1322 aa		29.13	■■■□□ 2.25
CHFR-206	ENST00000499045	DYNC1LI2	O43237	492 aa	Predicted RBP	29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	C1orf53	Q5VUE5	145 aa		29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	WWC2	Q6AWC2	1192 aa		29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	HEATR3	Q7Z4Q2	680 aa		29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	FCHSD1	Q86WN1	690 aa		29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	C7orf61	Q8IZ16	206 aa		29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	PCSK9	Q8NBP7	692 aa	Known RBP	29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	AP5M1	Q9H0R1	490 aa		29.12	■■■□□ 2.25
CHFR-206	ENST00000499045	PDRG1	Q9NUG6	133 aa		29.12	■■■□□ 2.25
CHFR-206	ENST00000499045		A0A1W2PQ45	241 aa	Predicted RBP	29.11	■■■□□ 2.25
CHFR-206	ENST00000499045		A0A1W2PQY0	241 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	EIF3J	O75822	258 aa	Known RBP	29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	PGM5	Q15124	567 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	NTRK3	Q16288	839 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	GNAS	Q5JWF2	1037 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	CCDC62	Q6P9F0	684 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	USP17L6P	Q6QN14	398 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	VSIG10L	Q86VR7	867 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	IL31RA	Q8NI17	732 aa		29.11	■■■□□ 2.25
CHFR-206	ENST00000499045	NKRF	O15226	690 aa	Known RBP eCLIP	29.1	■■■□□ 2.25
CHFR-206	ENST00000499045	ARIH2	O95376	493 aa		29.1	■■■□□ 2.25
CHFR-206	ENST00000499045	BEX3	Q00994	111 aa		29.1	■■■□□ 2.25
CHFR-206	ENST00000499045	TYW1B	Q6NUM6	668 aa		29.1	■■■□□ 2.25
CHFR-206	ENST00000499045	ZNF274	Q96GC6	653 aa	Predicted RBP	29.1	■■■□□ 2.25
CHFR-206	ENST00000499045	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	29.1	■■■□□ 2.25
CHFR-206	ENST00000499045	PSTPIP2	Q9H939	334 aa		29.1	■■■□□ 2.25
CHFR-206	ENST00000499045	ASGR1	P07306	291 aa		29.09	■■■□□ 2.25
CHFR-206	ENST00000499045	RTP1	P59025	263 aa		29.09	■■■□□ 2.25
CHFR-206	ENST00000499045	TTLL4	Q14679	1199 aa		29.09	■■■□□ 2.25
CHFR-206	ENST00000499045	FSCN1	Q16658	493 aa	Known RBP	29.09	■■■□□ 2.25
CHFR-206	ENST00000499045	SMARCC2	Q8TAQ2	1214 aa		29.09	■■■□□ 2.25
CHFR-206	ENST00000499045	CUL5	Q93034	780 aa		29.09	■■■□□ 2.25
CHFR-206	ENST00000499045	hCG_1984214	I3L0E3	225 aa		29.08	■■■□□ 2.25
CHFR-206	ENST00000499045	RGS20	O76081	388 aa		29.08	■■■□□ 2.25
CHFR-206	ENST00000499045	TXN	P10599	105 aa	Known RBP	29.08	■■■□□ 2.25
CHFR-206	ENST00000499045	PPP1R18	Q6NYC8	613 aa		29.08	■■■□□ 2.25
CHFR-206	ENST00000499045	SEPT14	Q6ZU15	432 aa		29.08	■■■□□ 2.25
CHFR-206	ENST00000499045	ZNF713	Q8N859	430 aa	Predicted RBP	29.08	■■■□□ 2.25
CHFR-206	ENST00000499045	DNAH12	Q6ZR08	3092 aa		29.08	■■■□□ 2.25
CHFR-206	ENST00000499045	STXBP3	O00186	592 aa		29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	ELP1	O95163	1332 aa		29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	MYCL	P12524	364 aa	Predicted RBP	29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	CCT2	P78371	535 aa	Known RBP	29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	PFKFB3	Q16875	520 aa	Predicted RBP	29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	LARP6	Q9BRS8	491 aa	Known RBP	29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	NCOA5	Q9HCD5	579 aa	Known RBP	29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	BARHL2	Q9NY43	387 aa		29.07	■■■□□ 2.24
CHFR-206	ENST00000499045	PRPF3	O43395	683 aa	Known RBP	29.06	■■■□□ 2.24
CHFR-206	ENST00000499045	IFNAR1	P17181	557 aa		29.06	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms