RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 LTV1Q96GA3 475 aaPredicted RBP4.49□□□□□ -1.69
CLTC-209ENST00000498711 MYD88Q99836 296 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 UBP1Q9NZI7 540 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 KLHL42Q9P2K6 505 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 TLR6Q9Y2C9 796 aa4.49□□□□□ -1.69
CLTC-209ENST00000498711 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.49□□□□□ -1.69
CLTC-209ENST00000498711 MAST3O60307 1309 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ZMYM6O95789 1325 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 PCDH11XQ9BZA7 1347 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 PCDH11YQ9BZA8 1340 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 DLEC1Q9Y238 1755 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 H3BQV1 296 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 FANCGO15287 622 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 DTNBO60941 627 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 CYP2C19P33261 490 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 NDUFA8P51970 172 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ANTXR2P58335 489 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 NEXNQ0ZGT2 675 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 STK3Q13188 491 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 TRIM28Q13263 835 aaKnown RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 PLEKHG4Q58EX7 1191 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 TPTE2Q6XPS3 522 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 CCDC73Q6ZRK6 1079 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 RSRC2Q7L4I2 434 aaKnown RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 CERS3Q8IU89 383 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 KLHDC4Q8TBB5 520 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 CEP44Q9C0F1 390 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 PAG1Q9NWQ8 432 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 SALL4Q9UJQ4 1053 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ZHX1Q9UKY1 873 aaPredicted RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 COL4A3BPQ9Y5P4 624 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ARAP2Q8WZ64 1704 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 NRXN2Q9P2S2 1712 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 M0R2C6 588 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 KINO60870 393 aaKnown RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 TADA3O75528 432 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 PF4P02776 101 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 CHGBP05060 677 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ZFYP08048 801 aaPredicted RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 TPM1P09493 284 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 GARTP22102 1010 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ETF1P62495 437 aaKnown RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 KIF23Q02241 960 aaPredicted RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 LMNB2Q03252 620 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ALX1Q15699 326 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 RESP18Q5W5W9 173 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 VSTM4Q8IW00 320 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 DRC7Q8IY82 874 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 CYP4X1Q8N118 509 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 AOPEPQ8N6M6 819 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 GOLM1Q8NBJ4 401 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 OR13H1Q8NG92 308 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 TCF12Q99081 682 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ISCA1Q9BUE6 129 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 FTOQ9C0B1 505 aaKnown RBP eCLIP4.48□□□□□ -1.69
CLTC-209ENST00000498711 XPO4Q9C0E2 1151 aaKnown RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 CRISPLD1Q9H336 500 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 ORC3Q9UBD5 711 aaPredicted RBP4.48□□□□□ -1.69
CLTC-209ENST00000498711 CLIC4Q9Y696 253 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 SCN7AQ01118 1682 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 KIAA1551Q9HCM1 1747 aa4.48□□□□□ -1.69
CLTC-209ENST00000498711 A0A0G2JLW4 131 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 KIF28PB7ZC32 967 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 EYA2O00167 538 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 SPTLC2O15270 562 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 WDHD1O75717 1129 aaPredicted RBP4.47□□□□□ -1.69
CLTC-209ENST00000498711 ZNF202O95125 648 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 CSF1RP07333 972 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 CELA3AP09093 270 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 ZNF18P17022 549 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 CHMP4BP1P59074 171 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 CAMK2GQ13555 558 aaPredicted RBP4.47□□□□□ -1.69
CLTC-209ENST00000498711 GRIN2CQ14957 1233 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 DPCR1Q3MIW9 517 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 SAMD5Q5TGI4 173 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 ANO1Q5XXA6 986 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 SPATA20Q8TB22 786 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 NKD1Q969G9 470 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 OSBP2Q969R2 916 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 ZNF496Q96IT1 587 aaPredicted RBP4.47□□□□□ -1.69
CLTC-209ENST00000498711 DCAF5Q96JK2 942 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 MTA3Q9BTC8 594 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 SPC25Q9HBM1 224 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 PSD3Q9NYI0 1048 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 PRKAB1Q9Y478 270 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 STK36Q9NRP7 1315 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 BCORQ6W2J9 1755 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 A0A0G2JS52 829 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 CCDC85CA6NKD9 419 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 EFCAB8A8MWE9 144 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 DNAJC6O75061 913 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 SASH3O75995 380 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 KCNQ4P56696 695 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 NTRK3Q16288 839 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 CCDC158Q5M9N0 1113 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 TOM1L2Q6ZVM7 507 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 NLRP8Q86W28 1048 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 IFNL2Q8IZJ0 200 aa4.47□□□□□ -1.69
CLTC-209ENST00000498711 IQUBQ8NA54 791 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms