RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 PPFIA3O75145 1194 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 PRKAR2AP13861 404 aaKnown RBP14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 HOXA13P31271 388 aaPredicted RBP14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 CYP2C19P33261 490 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 ALDH5A1P51649 535 aaPredicted RBP14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 PKN1Q16512 942 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 XRRA1Q6P2D8 792 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 SLC30A10Q6XR72 485 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 TAAR1Q96RJ0 339 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 ALG1Q9BT22 464 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 ZMYND12Q9H0C1 365 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 FAM184BQ9ULE4 1060 aa14.6□□□□□ -0.07
TMEM39B-209ENST00000498613 SOWAHBA6NEL2 793 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 EIF3JO75822 258 aaKnown RBP14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 STAM2O75886 525 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 CCND2P30279 289 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 CACNB2Q08289 660 aaPredicted RBP14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 AP3B2Q13367 1082 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 USP17L6PQ6QN14 398 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 ARMCX2Q7L311 632 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 REXO1Q8N1G1 1221 aaKnown RBP14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 SNX21Q969T3 373 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 VPS54Q9P1Q0 977 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 SMC3Q9UQE7 1217 aa14.59□□□□□ -0.07
TMEM39B-209ENST00000498613 RBBP6Q7Z6E9 1792 aaKnown RBP14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 MEIS2O14770 477 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 LARGE1O95461 756 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 MYCP01106 439 aaPredicted RBP14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 NR3C2P08235 984 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 MYCLP12524 364 aaPredicted RBP14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 TAL1P17542 331 aaPredicted RBP14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 ACVR2BQ13705 512 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 IQSEC1Q6DN90 963 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 KCNV1Q6PIU1 500 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 ZNF333Q96JL9 665 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 SPC25Q9HBM1 224 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 VTA1Q9NP79 307 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 PXMP2Q9NR77 195 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 FLRT1Q9NZU1 646 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 ZHX1Q9UKY1 873 aaPredicted RBP14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 PCDHA6Q9UN73 950 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 PCDHA4Q9UN74 947 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 PCDHA8Q9Y5H6 950 aa14.58□□□□□ -0.08
TMEM39B-209ENST00000498613 PLXNB2O15031 1838 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 K7ELQ4 463 aaPredicted RBP14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 OPLAHO14841 1288 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 CTDNEP1O95476 244 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 TFRCP02786 760 aaKnown RBP14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 CCL5P13501 91 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 AKR1A1P14550 325 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 EIF2AK2P19525 551 aaKnown RBP14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 ZNF76P36508 570 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 GNL2Q13823 731 aaKnown RBP14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 BECN1Q14457 450 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 GNPTABQ3T906 1256 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 NLRX1Q86UT6 975 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 BLIDQ8IZY5 108 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 C8orf76Q96K31 380 aa14.57□□□□□ -0.08
TMEM39B-209ENST00000498613 SEPT4O43236 478 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 SNAI1O95863 264 aaPredicted RBP14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 GJB1P08034 283 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 RARBP10826 455 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 PDCP20941 246 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 PRAMEF19Q5SWL8 479 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 MAP3K21Q5TCX8 1036 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 EEPD1Q7L9B9 569 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 VSIG10LQ86VR7 867 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 ARRDC4Q8NCT1 418 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 MORC4Q8TE76 937 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 PURBQ96QR8 312 aaKnown RBP14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 PDCD2LQ9BRP1 358 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 SMCHD1A6NHR9 2005 aa14.56□□□□□ -0.08
TMEM39B-209ENST00000498613 ZNF236Q9UL36 1845 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 CCDC194A0A1B0GVG4 234 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 H3BQV1 296 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 MAFGO15525 162 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 PDIA4P13667 645 aaKnown RBP14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 FDPSP14324 419 aaKnown RBP14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 TNFAIP2Q03169 654 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 TTLL4Q14679 1199 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 PGM5Q15124 567 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 UBE2SQ16763 222 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 BRDTQ58F21 947 aaPredicted RBP14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 JAKMIP3Q5VZ66 844 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 PCNX4Q63HM2 1172 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 KRT25Q7Z3Z0 450 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 SCFD2Q8WU76 684 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 INTS4Q96HW7 963 aaKnown RBP14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 CDHR1Q96JP9 859 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 AP5M1Q9H0R1 490 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 UNC93B1Q9H1C4 597 aa14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 DDX20Q9UHI6 824 aaKnown RBP14.55□□□□□ -0.08
TMEM39B-209ENST00000498613 NKRFO15226 690 aaKnown RBP eCLIP14.54□□□□□ -0.08
TMEM39B-209ENST00000498613 JAK2O60674 1132 aa14.54□□□□□ -0.08
TMEM39B-209ENST00000498613 SGPL1O95470 568 aa14.54□□□□□ -0.08
TMEM39B-209ENST00000498613 TGFB3P10600 412 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms