RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 MFSD6Q6ZSS7 791 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 CAGE1Q8TC20 777 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 CLEC4DQ8WXI8 215 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 MYOGP15173 224 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 PTGS1P23219 599 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 KCNJ6P48051 423 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 ZNF543Q08ER8 600 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 OTUD7AQ8TE49 926 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-217ENST00000498519 ESR2Q92731 530 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
SHANK2-217ENST00000498519 MYH4Q9Y623 1939 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 BMP1P13497 986 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 RASGRP2Q7LDG7 609 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 DGKHQ86XP1 1220 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 MCF2L2Q86YR7 1114 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 AFAP1L1Q8TED9 768 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 MTCH2Q9Y6C9 303 aa16.02■□□□□ 0.16
SHANK2-217ENST00000498519 BDP1A6H8Y1 2624 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 XIRP2A4UGR9 3374 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 SNHG28P0DPA3 235 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 HSPD1P10809 573 aaKnown RBP16.01■□□□□ 0.15
SHANK2-217ENST00000498519 CASTP20810 708 aaKnown RBP16.01■□□□□ 0.15
SHANK2-217ENST00000498519 PTGISQ16647 500 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 SESTD1Q86VW0 696 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 NSUN6Q8TEA1 469 aaKnown RBP16.01■□□□□ 0.15
SHANK2-217ENST00000498519 VWCEQ96DN2 955 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 IWS1Q96ST2 819 aa16.01■□□□□ 0.15
SHANK2-217ENST00000498519 ABCB11O95342 1321 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 SALL3Q9BXA9 1300 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 TLL1O43897 1013 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 EFCAB14O75071 495 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 GH1P01241 217 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 PDE1AP54750 535 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 STXBP2Q15833 593 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 ARNTL2Q8WYA1 636 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 KATNAL1Q9BW62 490 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 LMCD1Q9NZU5 365 aa16■□□□□ 0.15
SHANK2-217ENST00000498519 SELPP16109 830 aa15.99■□□□□ 0.15
SHANK2-217ENST00000498519 TAP1Q03518 808 aa15.99■□□□□ 0.15
SHANK2-217ENST00000498519 DGKDQ16760 1214 aa15.99■□□□□ 0.15
SHANK2-217ENST00000498519 HLA-CQ95604 372 aa15.99■□□□□ 0.15
SHANK2-217ENST00000498519 ZBED2Q9BTP6 218 aa15.99■□□□□ 0.15
SHANK2-217ENST00000498519 CCDC171Q6TFL3 1326 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 CHD7Q9P2D1 2997 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 ZNF213O14771 459 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 CHMP4BP1P59074 171 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 USH1GQ495M9 461 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 CCDC62Q6P9F0 684 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 C7orf31Q8N865 590 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 FAM122AQ96E09 287 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 FAM227BQ96M60 508 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 KAT14Q9H8E8 782 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 CERS4Q9HA82 394 aa15.98■□□□□ 0.15
SHANK2-217ENST00000498519 MRPL11Q9Y3B7 192 aaKnown RBP15.98■□□□□ 0.15
SHANK2-217ENST00000498519 A0A0D9SFI3 127 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 ABHD14A-ACY1A0A1B0GW23 586 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 EIF3JO75822 258 aaKnown RBP15.97■□□□□ 0.15
SHANK2-217ENST00000498519 MMP3P08254 477 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 HAND2P61296 217 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 TFF2Q03403 129 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 RBL2Q08999 1139 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 CDC37Q16543 378 aaPredicted RBP15.97■□□□□ 0.15
SHANK2-217ENST00000498519 ASPRV1Q53RT3 343 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 CNKSR3Q6P9H4 555 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 LRRC8DQ7L1W4 858 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 AFG1LQ8WV93 481 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 COPS5Q92905 334 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 RMDN3Q96TC7 470 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 ARIH1Q9Y4X5 557 aaPredicted RBP15.97■□□□□ 0.15
SHANK2-217ENST00000498519 LRRC37A2A6NM11 1700 aa15.97■□□□□ 0.15
SHANK2-217ENST00000498519 PLA2G5P39877 138 aa15.96■□□□□ 0.15
SHANK2-217ENST00000498519 HDAC1Q13547 482 aaPredicted RBP15.96■□□□□ 0.15
SHANK2-217ENST00000498519 LAMC2Q13753 1193 aa15.96■□□□□ 0.15
SHANK2-217ENST00000498519 ARHGEF16Q5VV41 709 aa15.96■□□□□ 0.15
SHANK2-217ENST00000498519 KCNV1Q6PIU1 500 aa15.96■□□□□ 0.15
SHANK2-217ENST00000498519 SEPT14Q6ZU15 432 aa15.96■□□□□ 0.15
SHANK2-217ENST00000498519 PNMA1Q8ND90 353 aa15.96■□□□□ 0.15
SHANK2-217ENST00000498519 EMID1Q96A84 441 aaPredicted RBP15.96■□□□□ 0.15
SHANK2-217ENST00000498519 MAP3K20Q9NYL2 800 aaKnown RBP15.96■□□□□ 0.15
SHANK2-217ENST00000498519 MCM3APO60318 1980 aa15.96■□□□□ 0.15
SHANK2-217ENST00000498519 RFXAPO00287 272 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 DHX16O60231 1041 aaKnown RBP15.95■□□□□ 0.14
SHANK2-217ENST00000498519 ARIH2O95376 493 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 GOLGA8HP0CJ92 632 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 KCNQ1P51787 676 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 WDR5P61964 334 aaKnown RBP15.95■□□□□ 0.14
SHANK2-217ENST00000498519 ARHGAP1Q07960 439 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 TRAF1Q13077 416 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 NMIQ13287 307 aaPredicted RBP15.95■□□□□ 0.14
SHANK2-217ENST00000498519 PTK7Q13308 1070 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 GRB10Q13322 594 aa15.95■□□□□ 0.14
SHANK2-217ENST00000498519 AAMPQ13685 434 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms