RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 C6orf183Q5T699 404 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.36
PBX1-211ENST00000498497 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 SPATA17Q96L03 361 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 ALG1Q9BT22 464 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 MTA3Q9BTC8 594 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 AP1M1Q9BXS5 423 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 VCXQ9H320 206 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 FBXL5Q9UKA1 691 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 SNX12Q9UMY4 172 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 ZNF510Q9Y2H8 683 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 IQGAP1P46940 1657 aa12.77□□□□□ -0.36
PBX1-211ENST00000498497 MRPS35P82673 323 aaKnown RBP12.77□□□□□ -0.37
PBX1-211ENST00000498497 PAPD7Q5XG87 772 aaKnown RBP12.77□□□□□ -0.37
PBX1-211ENST00000498497 DNAAF5Q86Y56 855 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 GDAP1Q8TB36 358 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 CCHCR1Q8TD31 782 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.37
PBX1-211ENST00000498497 DDX18Q9NVP1 670 aaKnown RBP12.77□□□□□ -0.37
PBX1-211ENST00000498497 CDK12Q9NYV4 1490 aaPredicted RBP12.77□□□□□ -0.37
PBX1-211ENST00000498497 A6NJR5 290 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 FLOT1O75955 427 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 ALDH1B1P30837 517 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 GALK1P51570 392 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 C16orf87Q6PH81 154 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 TSHZ1Q6ZSZ6 1077 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 BRAPQ7Z569 592 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 RAVER1Q8IY67 606 aaKnown RBP12.77□□□□□ -0.37
PBX1-211ENST00000498497 LINS1Q8NG48 757 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 CEP70Q8NHQ1 597 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 DNAJC9Q8WXX5 260 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 HIC2Q96JB3 615 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 FGFR1OP2Q9NVK5 253 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 SLC12A6Q9UHW9 1150 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 PAIP2BQ9ULR5 123 aaKnown RBP12.77□□□□□ -0.37
PBX1-211ENST00000498497 ATP8A1Q9Y2Q0 1164 aa12.77□□□□□ -0.37
PBX1-211ENST00000498497 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.76□□□□□ -0.37
PBX1-211ENST00000498497 TRIM43BA6NCK2 446 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 IL13P35225 146 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 PLCD1P51178 756 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 ZNF844Q08AG5 666 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 KRT32Q14532 448 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 CWF19L2Q2TBE0 894 aaKnown RBP12.76□□□□□ -0.37
PBX1-211ENST00000498497 RUFY4Q6ZNE9 571 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 MORC4Q8TE76 937 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 C17orf50Q8WW18 174 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 ADGRL3Q9HAR2 1447 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 TMBIM4Q9HC24 238 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 KCNJ14Q9UNX9 436 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 NFKBIAP25963 317 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
PBX1-211ENST00000498497 SPA17Q15506 151 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 DZIP1Q86YF9 867 aaKnown RBP12.76□□□□□ -0.37
PBX1-211ENST00000498497 DACH1Q9UI36 760 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 AOX1Q06278 1338 aa12.76□□□□□ -0.37
PBX1-211ENST00000498497 RARAP10276 462 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 VPS41P49754 854 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 ARID5AQ03989 594 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 DYNC1I2Q13409 638 aaKnown RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 APBB1IPQ7Z5R6 666 aaPredicted RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 EPSTI1Q96J88 318 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 RPGRIP1Q96KN7 1286 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 AGBL1Q96MI9 1066 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 PLVAPQ9BX97 442 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 DNAJC17Q9NVM6 304 aaKnown RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 ATXN10Q9UBB4 475 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 U3KPZ7 1027 aaPredicted RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 LAMC1P11047 1609 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 COL15A1P39059 1388 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 MYH13Q9UKX3 1938 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 CUL7Q14999 1698 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 TACC1O75410 805 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 SERPINB3P29508 390 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 PTDSS1P48651 473 aaKnown RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 TSNAXIP1Q2TAA8 658 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.75□□□□□ -0.37
PBX1-211ENST00000498497 LACTB2Q53H82 288 aaPredicted RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 APTXQ7Z2E3 356 aaKnown RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 SIKE1Q9BRV8 207 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 NHEJ1Q9H9Q4 299 aaPredicted RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 DENND2AQ9ULE3 1009 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 PHF24Q9UPV7 400 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 RAD51CO43502 376 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 ATP9AO75110 1047 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 CCR3P51677 355 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 COPB1P53618 953 aaKnown RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 ZNF268Q14587 947 aaPredicted RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 TTF1Q15361 905 aaPredicted RBP12.75□□□□□ -0.37
PBX1-211ENST00000498497 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 TSPAN18Q96SJ8 248 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 PAGR1Q9BTK6 254 aa12.75□□□□□ -0.37
PBX1-211ENST00000498497 IFIH1Q9BYX4 1025 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms