RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CUL5Q93034 780 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 WDR11Q9BZH6 1224 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 PHF24Q9UPV7 400 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 GNEQ9Y223 722 aaKnown RBP14.78□□□□□ -0.04
HSPG2-213ENST00000498495 Q9Y3F1 56 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 MCM3APO60318 1980 aa14.78□□□□□ -0.04
HSPG2-213ENST00000498495 hCG_1642624A0A1W2PR95 340 aa14.77□□□□□ -0.05
HSPG2-213ENST00000498495 RBM47A0AV96 593 aaKnown RBP14.77□□□□□ -0.05
HSPG2-213ENST00000498495 EIF2AK2P19525 551 aaKnown RBP14.77□□□□□ -0.05
HSPG2-213ENST00000498495 ADD1P35611 737 aaKnown RBP14.77□□□□□ -0.05
HSPG2-213ENST00000498495 LRRC26Q2I0M4 334 aa14.77□□□□□ -0.05
HSPG2-213ENST00000498495 DUSP28Q4G0W2 176 aa14.77□□□□□ -0.05
HSPG2-213ENST00000498495 C7orf61Q8IZ16 206 aa14.77□□□□□ -0.05
HSPG2-213ENST00000498495 SMARCC2Q8TAQ2 1214 aa14.77□□□□□ -0.05
HSPG2-213ENST00000498495 AGXT2Q9BYV1 514 aa14.77□□□□□ -0.05
HSPG2-213ENST00000498495 PXMP2Q9NR77 195 aa14.77□□□□□ -0.05
HSPG2-213ENST00000498495 V9GY48 417 aaPredicted RBP14.77□□□□□ -0.05
HSPG2-213ENST00000498495 FRMPD3Q5JV73 1810 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 MYADML2A6NDP7 307 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 MOXD2PA6NHM9 499 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 EIF3JO75822 258 aaKnown RBP14.76□□□□□ -0.05
HSPG2-213ENST00000498495 NR3C2P08235 984 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 MYCLP12524 364 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-213ENST00000498495 CDC27P30260 824 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 ACLYP53396 1101 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 IRX5P78411 483 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-213ENST00000498495 TTLL4Q14679 1199 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 TMEM63BQ5T3F8 832 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 SEPT14Q6ZU15 432 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 TLK2Q86UE8 772 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 SCFD2Q8WU76 684 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 VTI1AQ96AJ9 217 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 UPF3BQ9BZI7 483 aaKnown RBP14.76□□□□□ -0.05
HSPG2-213ENST00000498495 UPF3AQ9H1J1 476 aaKnown RBP14.76□□□□□ -0.05
HSPG2-213ENST00000498495 FAM217BQ9NTX9 383 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-213ENST00000498495 PDRG1Q9NUG6 133 aa14.76□□□□□ -0.05
HSPG2-213ENST00000498495 LCTP09848 1927 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 A0A1W2PQ45 241 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-213ENST00000498495 A0A1W2PQY0 241 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 NKRFO15226 690 aaKnown RBP eCLIP14.75□□□□□ -0.05
HSPG2-213ENST00000498495 ZEB2O60315 1214 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 ASGR1P07306 291 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 TXNP10599 105 aaKnown RBP14.75□□□□□ -0.05
HSPG2-213ENST00000498495 CST5P28325 142 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-213ENST00000498495 ANAPC15P60006 121 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 NKX3-2P78367 333 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 BEX3Q00994 111 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 CCSAPQ6IQ19 270 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-213ENST00000498495 USP17L6PQ6QN14 398 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 HEATR3Q7Z4Q2 680 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 GLT1D1Q96MS3 346 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 PDCD2LQ9BRP1 358 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 PSTPIP2Q9H939 334 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 STARD7Q9NQZ5 370 aa14.75□□□□□ -0.05
HSPG2-213ENST00000498495 CNTNAP5Q8WYK1 1306 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 SEC24BO95487 1268 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 PDIA3P30101 505 aaKnown RBP14.74□□□□□ -0.05
HSPG2-213ENST00000498495 EVCP57679 992 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 RTP1P59025 263 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
HSPG2-213ENST00000498495 FUT2Q10981 343 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 TOB2Q14106 344 aaPredicted RBP14.74□□□□□ -0.05
HSPG2-213ENST00000498495 PGM5Q15124 567 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 FSCN1Q16658 493 aaKnown RBP14.74□□□□□ -0.05
HSPG2-213ENST00000498495 VSIG10LQ86VR7 867 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 ZMYND8Q9ULU4 1186 aaPredicted RBP14.74□□□□□ -0.05
HSPG2-213ENST00000498495 ATP11BQ9Y2G3 1177 aa14.74□□□□□ -0.05
HSPG2-213ENST00000498495 TNRC18O15417 2968 aaPredicted RBP14.74□□□□□ -0.05
HSPG2-213ENST00000498495 MKI67P46013 3256 aaKnown RBP14.74□□□□□ -0.05
HSPG2-213ENST00000498495 PIK3CDO00329 1044 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 MEIS2O14770 477 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 CTAGE5O15320 804 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 PTGS1P23219 599 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 CCND2P30279 289 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 NAPAP54920 295 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 AKAP17AQ02040 695 aaKnown RBP14.73□□□□□ -0.05
HSPG2-213ENST00000498495 BRDTQ58F21 947 aaPredicted RBP14.73□□□□□ -0.05
HSPG2-213ENST00000498495 C1orf53Q5VUE5 145 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 OR6J1Q8NGC5 347 aa14.73□□□□□ -0.05
HSPG2-213ENST00000498495 GPKOWQ92917 476 aaPredicted RBP eCLIP14.73□□□□□ -0.05
HSPG2-213ENST00000498495 ZNF274Q96GC6 653 aaPredicted RBP14.73□□□□□ -0.05
HSPG2-213ENST00000498495 LARP6Q9BRS8 491 aaKnown RBP14.73□□□□□ -0.05
HSPG2-213ENST00000498495 ELP1O95163 1332 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 hCG_1984214I3L0E3 225 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 PRPF3O43395 683 aaKnown RBP14.72□□□□□ -0.05
HSPG2-213ENST00000498495 CABYRO75952 493 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 SYN1P17600 705 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 CPT1AP50416 773 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 SNX17Q15036 470 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 WWC2Q6AWC2 1192 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 CCDC62Q6P9F0 684 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 KCNV1Q6PIU1 500 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 ZNF713Q8N859 430 aaPredicted RBP14.72□□□□□ -0.05
HSPG2-213ENST00000498495 COPS5Q92905 334 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 ZFP91Q96JP5 570 aaPredicted RBP14.72□□□□□ -0.05
HSPG2-213ENST00000498495 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
HSPG2-213ENST00000498495 PRKAG2Q9UGJ0 569 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 DDX41Q9UJV9 622 aaKnown RBP14.72□□□□□ -0.05
HSPG2-213ENST00000498495 MRVI1Q9Y6F6 885 aa14.72□□□□□ -0.05
HSPG2-213ENST00000498495 PDE4DIPQ5VU43 2346 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms