RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PTGISQ16647 500 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 RCSD1Q6JBY9 416 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 GJD3Q8N144 294 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 MORC4Q8TE76 937 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 CD320Q9NPF0 282 aa13.8□□□□□ -0.2
CDK9-205ENST00000498339 WDFY4Q6ZS81 3184 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 NLRC5Q86WI3 1866 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 NKRFO15226 690 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDK9-205ENST00000498339 KPNA6O60684 536 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 PLA2G6O60733 806 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 DEFB103AP81534 67 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 PTPN11Q06124 597 aaPredicted RBP13.79□□□□□ -0.2
CDK9-205ENST00000498339 PPARAQ07869 468 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 LRRFIP1Q32MZ4 808 aaKnown RBP13.79□□□□□ -0.2
CDK9-205ENST00000498339 TSHZ3Q63HK5 1081 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 AFAP1L1Q8TED9 768 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 COPS5Q92905 334 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 LMCD1Q9NZU5 365 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 MYH6P13533 1939 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 KIAA1217Q5T5P2 1943 aa13.79□□□□□ -0.2
CDK9-205ENST00000498339 MYH7BA7E2Y1 1941 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 MICAL3Q7RTP6 2002 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 NMT2O60551 498 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 TXNP10599 105 aaKnown RBP13.78□□□□□ -0.2
CDK9-205ENST00000498339 SLC16A2P36021 539 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 FAM117BQ6P1L5 589 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 CNKSR3Q6P9H4 555 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 LRRC8DQ7L1W4 858 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 CAGE1Q8TC20 777 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 TGS1Q96RS0 853 aaKnown RBP13.78□□□□□ -0.2
CDK9-205ENST00000498339 SUGCTQ9HAC7 445 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
CDK9-205ENST00000498339 LOC102724159A0A0B4J2E5 919 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 RBM47A0AV96 593 aaKnown RBP13.77□□□□□ -0.21
CDK9-205ENST00000498339 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
CDK9-205ENST00000498339 ALADP13716 330 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 IL9P15248 144 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 SELPP16109 830 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 MRE11P49959 708 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 PWP2Q15269 919 aaKnown RBP13.77□□□□□ -0.21
CDK9-205ENST00000498339 LEXMQ3ZCV2 418 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 SYDE2Q5VT97 1194 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 FRMPD2Q68DX3 1309 aaPredicted RBP13.77□□□□□ -0.21
CDK9-205ENST00000498339 PTCRAQ6ISU1 281 aaPredicted RBP13.77□□□□□ -0.21
CDK9-205ENST00000498339 EP400NLQ6ZTU2 488 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 FAM178BQ8IXR5 827 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 DCAF4Q8WV16 495 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 RAD9AQ99638 391 aa13.77□□□□□ -0.21
CDK9-205ENST00000498339 RANBP17Q9H2T7 1088 aaKnown RBP13.77□□□□□ -0.21
CDK9-205ENST00000498339 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
CDK9-205ENST00000498339 A6NJR5 290 aa13.76□□□□□ -0.21
CDK9-205ENST00000498339 B4DLN1 442 aa13.76□□□□□ -0.21
CDK9-205ENST00000498339 GJB5O95377 273 aa13.76□□□□□ -0.21
CDK9-205ENST00000498339 MRPL12P52815 198 aaKnown RBP13.76□□□□□ -0.21
CDK9-205ENST00000498339 CTDSPL2Q05D32 466 aa13.76□□□□□ -0.21
CDK9-205ENST00000498339 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
CDK9-205ENST00000498339 SEC62Q99442 399 aaKnown RBP13.76□□□□□ -0.21
CDK9-205ENST00000498339 GPCPD1Q9NPB8 672 aa13.76□□□□□ -0.21
CDK9-205ENST00000498339 TOMM22Q9NS69 142 aa13.76□□□□□ -0.21
CDK9-205ENST00000498339 LINC01553A4QN01 128 aa13.75□□□□□ -0.21
CDK9-205ENST00000498339 ERVK-21P61565 698 aa13.75□□□□□ -0.21
CDK9-205ENST00000498339 GDF6Q6KF10 455 aaPredicted RBP13.75□□□□□ -0.21
CDK9-205ENST00000498339 CHST3Q7LGC8 479 aa13.75□□□□□ -0.21
CDK9-205ENST00000498339 FBXO22Q8NEZ5 403 aa13.75□□□□□ -0.21
CDK9-205ENST00000498339 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.75□□□□□ -0.21
CDK9-205ENST00000498339 FSD1Q9BTV5 496 aa13.75□□□□□ -0.21
CDK9-205ENST00000498339 ABHD14A-ACY1A0A1B0GW23 586 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 EFCAB14O75071 495 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 PARNO95453 639 aaKnown RBP13.74□□□□□ -0.21
CDK9-205ENST00000498339 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
CDK9-205ENST00000498339 IKBKEQ14164 716 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 PTPROQ16827 1216 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 C7orf31Q8N865 590 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 AFG1LQ8WV93 481 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 IL17RBQ9NRM6 502 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 C5orf42Q9H799 3197 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 RALGAPA2Q2PPJ7 1873 aa13.74□□□□□ -0.21
CDK9-205ENST00000498339 ATG2AQ2TAZ0 1938 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
CDK9-205ENST00000498339 H3BQ06 376 aaPredicted RBP13.73□□□□□ -0.21
CDK9-205ENST00000498339 DCXO43602 365 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 NBNO60934 754 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 ARIH2O95376 493 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 GH1P01241 217 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 MMP3P08254 477 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 CKBP12277 381 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 NHLH1Q02575 133 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 PUS10Q3MIT2 529 aaKnown RBP13.73□□□□□ -0.21
CDK9-205ENST00000498339 USH1GQ495M9 461 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 RRP12Q5JTH9 1297 aaKnown RBP13.73□□□□□ -0.21
CDK9-205ENST00000498339 SEPT14Q6ZU15 432 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 DNERQ8NFT8 737 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 CLEC4DQ8WXI8 215 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 DHX38Q92620 1227 aaKnown RBP13.73□□□□□ -0.21
CDK9-205ENST00000498339 C17orf80Q9BSJ5 609 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 INCENPQ9NQS7 918 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms