RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 HACL1Q9UJ83 578 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 PPP1R9AQ9ULJ8 1098 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 U3KQE9 123 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 IBTKQ9P2D0 1353 aaPredicted RBP6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 ITGB4P16144 1822 aa6.52□□□□□ -1.37
HMGXB4-208ENST00000498325 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 TMEM265A0A087WTH1 108 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 B8ZZF3 427 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 A1BGP04217 495 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 GRIA4P48058 902 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 SAPCD2Q86UD0 394 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 C2CD5Q86YS7 1000 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 SIAH1Q8IUQ4 282 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 SIRT2Q8IXJ6 389 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 BACH2Q9BYV9 841 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 PIDD1Q9HB75 910 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 CRIM1Q9NZV1 1036 aa6.51□□□□□ -1.37
HMGXB4-208ENST00000498325 SYNGAP1Q96PV0 1343 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 USP42Q9H9J4 1324 aaKnown RBP6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 A0A0C4DFX4 3053 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 CCDC88AQ3V6T2 1871 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 CARMIL3Q8ND23 1372 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 B3GALT4O96024 378 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 POLR3DP05423 398 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 CEACAM5P06731 702 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 USP5P45974 858 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 HSP90AB4PQ58FF6 505 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 PNMA8AQ86V59 439 aaPredicted RBP6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 DNAJC10Q8IXB1 793 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 MYD88Q99836 296 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 LNPKQ9C0E8 428 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 BCL11AQ9H165 835 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 LIN7BQ9HAP6 207 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 ZFYVE28Q9HCC9 887 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 LRRFIP2Q9Y608 721 aaKnown RBP6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 LTBP3Q9NS15 1303 aa6.5□□□□□ -1.37
HMGXB4-208ENST00000498325 A0A1W2PP55 124 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 GRM8O00222 908 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 EIF5BO60841 1220 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 RAB11FIP3O75154 756 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 NBPF7P0C2Y1 421 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 ZSCAN22P10073 491 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 CYP19A1P11511 503 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 OXCT1P55809 520 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 GCKRQ14397 625 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 CWF19L2Q2TBE0 894 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 HSP90AB3PQ58FF7 597 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 KIF6Q6ZMV9 814 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 LRP10Q7Z4F1 713 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 CTU1Q7Z7A3 348 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 SSH3Q8TE77 659 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 LIN37Q96GY3 246 aaPredicted RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 TCF12Q99081 682 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 TAOK3Q9H2K8 898 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 ATXN3LQ9H3M9 355 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 PRDM7Q9NQW5 492 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 PLAGL2Q9UPG8 496 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 MKI67P46013 3256 aaKnown RBP6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 UTYO14607 1347 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 CNTNAP4Q9C0A0 1308 aa6.49□□□□□ -1.37
HMGXB4-208ENST00000498325 SCN4AP35499 1836 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 H0YIN7 160 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 TMPRSS2O15393 492 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 SRGAP3O43295 1099 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 LEFTY1O75610 366 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 IGKV5-2P06315 115 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 IL6STP40189 918 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 PIP4K2AP48426 406 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 MTX1Q13505 466 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 TTLL7Q6ZT98 887 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 SYDE1Q6ZW31 735 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 PPP1R42Q7Z4L9 355 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 SKAP1Q86WV1 359 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 HOMEZQ8IX15 550 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 SMYD4Q8IYR2 804 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 CCDC191Q8NCU4 936 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 LRRCC1Q9C099 1032 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 CWC25Q9NXE8 425 aaPredicted RBP6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 RNF186Q9NXI6 227 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 LMCD1Q9NZU5 365 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 CUL9Q8IWT3 2517 aa6.48□□□□□ -1.37
HMGXB4-208ENST00000498325 COL6A3P12111 3177 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 DLEC1Q9Y238 1755 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 A0A087WZG4 1122 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 PNMA6EA0A0J9YXQ4 647 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 ERVV-1B6SEH8 477 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 SURF6O75683 361 aaKnown RBP6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 ITIH2P19823 946 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 BUD31P41223 144 aaPredicted RBP6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 AP3B2Q13367 1082 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 TCIRG1Q13488 830 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 NFIXQ14938 502 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 USPL1Q5W0Q7 1092 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 ERC1Q8IUD2 1116 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 SYNE4Q8N205 404 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 GTF3C2Q8WUA4 911 aaPredicted RBP6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 ZNF622Q969S3 477 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■□□□□ 8.6
HMGXB4-208ENST00000498325 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 UPF2Q9HAU5 1272 aaKnown RBP6.47□□□□□ -1.37
HMGXB4-208ENST00000498325 MAP3K15Q6ZN16 1313 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms