RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 STXBP2Q15833 593 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 GNASQ5JWF2 1037 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 SLC39A5Q6ZMH5 540 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 RUFY3Q7L099 469 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 FCHSD1Q86WN1 690 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 PCSK9Q8NBP7 692 aaKnown RBP19.29■□□□□ 0.68
ABCF3-218ENST00000498136 VTI1AQ96AJ9 217 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 IWS1Q96ST2 819 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 TSEN34Q9BSV6 310 aaKnown RBP19.29■□□□□ 0.68
ABCF3-218ENST00000498136 UPF3AQ9H1J1 476 aaKnown RBP19.29■□□□□ 0.68
ABCF3-218ENST00000498136 PXMP2Q9NR77 195 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 ZMYND8Q9ULU4 1186 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-218ENST00000498136 ATP11BQ9Y2G3 1177 aa19.29■□□□□ 0.68
ABCF3-218ENST00000498136 A0A1W2PQ45 241 aaPredicted RBP19.28■□□□□ 0.68
ABCF3-218ENST00000498136 A0A1W2PQY0 241 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 MOXD2PA6NHM9 499 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 EIF5BO60841 1220 aaKnown RBP19.28■□□□□ 0.68
ABCF3-218ENST00000498136 PTGS1P23219 599 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 ACLYP53396 1101 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 RTP1P59025 263 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 BEX3Q00994 111 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 PPP2R5BQ15173 497 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 HEATR3Q7Z4Q2 680 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 KLHDC9Q8NEP7 349 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 CUL5Q93034 780 aa19.28■□□□□ 0.68
ABCF3-218ENST00000498136 GNEQ9Y223 722 aaKnown RBP19.28■□□□□ 0.68
ABCF3-218ENST00000498136 CNTNAP5Q8WYK1 1306 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 KIAA1217Q5T5P2 1943 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 ASGR1P07306 291 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 NR3C2P08235 984 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.68
ABCF3-218ENST00000498136 SYN1P17600 705 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 CST5P28325 142 aaPredicted RBP19.27■□□□□ 0.68
ABCF3-218ENST00000498136 RCAN1P53805 252 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 GHRHRQ02643 423 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 DUSP28Q4G0W2 176 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 TMEM63BQ5T3F8 832 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 SEPT14Q6ZU15 432 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 SCFD2Q8WU76 684 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 UPF3BQ9BZI7 483 aaKnown RBP19.27■□□□□ 0.68
ABCF3-218ENST00000498136 ZSWIM6Q9HCJ5 1215 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 STARD7Q9NQZ5 370 aa19.27■□□□□ 0.68
ABCF3-218ENST00000498136 CCDC196A0A1B0GTZ2 297 aa19.26■□□□□ 0.67
ABCF3-218ENST00000498136 ZEB2O60315 1214 aa19.26■□□□□ 0.67
ABCF3-218ENST00000498136 TXNP10599 105 aaKnown RBP19.26■□□□□ 0.67
ABCF3-218ENST00000498136 CDC27P30260 824 aa19.26■□□□□ 0.67
ABCF3-218ENST00000498136 TTLL4Q14679 1199 aa19.26■□□□□ 0.67
ABCF3-218ENST00000498136 FSCN1Q16658 493 aaKnown RBP19.26■□□□□ 0.67
ABCF3-218ENST00000498136 GPKOWQ92917 476 aaPredicted RBP eCLIP19.26■□□□□ 0.67
ABCF3-218ENST00000498136 GLT1D1Q96MS3 346 aa19.26■□□□□ 0.67
ABCF3-218ENST00000498136 Q9Y3F1 56 aa19.26■□□□□ 0.67
ABCF3-218ENST00000498136 RBM47A0AV96 593 aaKnown RBP19.25■□□□□ 0.67
ABCF3-218ENST00000498136 ADD1P35611 737 aaKnown RBP19.25■□□□□ 0.67
ABCF3-218ENST00000498136 PGM5Q15124 567 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 TRIM60Q495X7 471 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 CCSAPQ6IQ19 270 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-218ENST00000498136 FBXL16Q8N461 479 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 OR6J1Q8NGC5 347 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 PDCD2LQ9BRP1 358 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 AGXT2Q9BYV1 514 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 TM6SF1Q9BZW5 370 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 PRKAG2Q9UGJ0 569 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 V9GY48 417 aaPredicted RBP19.25■□□□□ 0.67
ABCF3-218ENST00000498136 DNAH12Q6ZR08 3092 aa19.25■□□□□ 0.67
ABCF3-218ENST00000498136 NKRFO15226 690 aaKnown RBP eCLIP19.24■□□□□ 0.67
ABCF3-218ENST00000498136 CCND2P30279 289 aa19.24■□□□□ 0.67
ABCF3-218ENST00000498136 USP17L6PQ6QN14 398 aa19.24■□□□□ 0.67
ABCF3-218ENST00000498136 CHRDL2Q6WN34 429 aa19.24■□□□□ 0.67
ABCF3-218ENST00000498136 PSTPIP2Q9H939 334 aa19.24■□□□□ 0.67
ABCF3-218ENST00000498136 PRDM5Q9NQX1 630 aaPredicted RBP19.24■□□□□ 0.67
ABCF3-218ENST00000498136 FAM217BQ9NTX9 383 aaPredicted RBP19.24■□□□□ 0.67
ABCF3-218ENST00000498136 PDRG1Q9NUG6 133 aa19.24■□□□□ 0.67
ABCF3-218ENST00000498136 CTAGE5O15320 804 aa19.23■□□□□ 0.67
ABCF3-218ENST00000498136 EIF3JO75822 258 aaKnown RBP19.23■□□□□ 0.67
ABCF3-218ENST00000498136 NAPAP54920 295 aa19.23■□□□□ 0.67
ABCF3-218ENST00000498136 CCT2P78371 535 aaKnown RBP19.23■□□□□ 0.67
ABCF3-218ENST00000498136 TOB2Q14106 344 aaPredicted RBP19.23■□□□□ 0.67
ABCF3-218ENST00000498136 LY6KQ17RY6 165 aa19.23■□□□□ 0.67
ABCF3-218ENST00000498136 COPS5Q92905 334 aa19.23■□□□□ 0.67
ABCF3-218ENST00000498136 MRVI1Q9Y6F6 885 aa19.23■□□□□ 0.67
ABCF3-218ENST00000498136 CEP290O15078 2479 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 PQBP1O60828 265 aaKnown RBP19.22■□□□□ 0.67
ABCF3-218ENST00000498136 ARIH2O95376 493 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 CPT1AP50416 773 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 NKX3-2P78367 333 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 FUT2Q10981 343 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 SNX17Q15036 470 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 BRDTQ58F21 947 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-218ENST00000498136 WWC2Q6AWC2 1192 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 CXCL17Q6UXB2 119 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 IL31RAQ8NI17 732 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-218ENST00000498136 LARP6Q9BRS8 491 aaKnown RBP19.22■□□□□ 0.67
ABCF3-218ENST00000498136 COLQQ9Y215 455 aaPredicted RBP19.22■□□□□ 0.67
ABCF3-218ENST00000498136 ELP1O95163 1332 aa19.22■□□□□ 0.67
ABCF3-218ENST00000498136 A0A0U1RQG5 324 aaPredicted RBP19.21■□□□□ 0.67
ABCF3-218ENST00000498136 MEIS2O14770 477 aa19.21■□□□□ 0.67
ABCF3-218ENST00000498136 MYL3P08590 195 aa19.21■□□□□ 0.67
ABCF3-218ENST00000498136 PDIA3P30101 505 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms