RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 PDE4AP27815 886 aa21.7■■□□□ 1.06
PRKCB-209ENST00000498058 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
PRKCB-209ENST00000498058 PNMA2Q9UL42 364 aa21.7■■□□□ 1.06
PRKCB-209ENST00000498058 CHD7Q9P2D1 2997 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 RBAK-RBAKDNI3L0D1 243 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 CPT1AP50416 773 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 PPP2R5BQ15173 497 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 QRICH1Q2TAL8 776 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 NBPF20Q3BBV1 942 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 IQCA1Q86XH1 822 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 SYTL5Q8TDW5 730 aaPredicted RBP21.69■■□□□ 1.06
PRKCB-209ENST00000498058 SCFD2Q8WU76 684 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 MTG1Q9BT17 334 aaPredicted RBP21.69■■□□□ 1.06
PRKCB-209ENST00000498058 PRDM12Q9H4Q4 367 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 KAT14Q9H8E8 782 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 PRDM6Q9NQX0 595 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 TNKSO95271 1327 aa21.69■■□□□ 1.06
PRKCB-209ENST00000498058 KIAA1217Q5T5P2 1943 aa21.68■■□□□ 1.06
PRKCB-209ENST00000498058 A6NJR5 290 aa21.68■■□□□ 1.06
PRKCB-209ENST00000498058 TXNP10599 105 aaKnown RBP21.68■■□□□ 1.06
PRKCB-209ENST00000498058 ADGRE1Q14246 886 aa21.68■■□□□ 1.06
PRKCB-209ENST00000498058 CCDC62Q6P9F0 684 aa21.68■■□□□ 1.06
PRKCB-209ENST00000498058 STAG2Q8N3U4 1231 aa21.68■■□□□ 1.06
PRKCB-209ENST00000498058 NKX2-4Q9H2Z4 354 aa21.68■■□□□ 1.06
PRKCB-209ENST00000498058 JMJD4Q9H9V9 463 aa21.68■■□□□ 1.06
PRKCB-209ENST00000498058 SPTBN5Q9NRC6 3674 aaKnown RBP21.68■■□□□ 1.06
PRKCB-209ENST00000498058 TET1Q8NFU7 2136 aa21.67■■□□□ 1.06
PRKCB-209ENST00000498058 NKRFO15226 690 aaKnown RBP eCLIP21.67■■□□□ 1.06
PRKCB-209ENST00000498058 GSPT1P15170 499 aaKnown RBP21.67■■□□□ 1.06
PRKCB-209ENST00000498058 RABGGTBP53611 331 aa21.67■■□□□ 1.06
PRKCB-209ENST00000498058 CYB5R4Q7L1T6 521 aa21.67■■□□□ 1.06
PRKCB-209ENST00000498058 VAT1LQ9HCJ6 419 aa21.67■■□□□ 1.06
PRKCB-209ENST00000498058 TRIP12Q14669 1992 aaPredicted RBP21.67■■□□□ 1.06
PRKCB-209ENST00000498058 ABCB11O95342 1321 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 HIP1O00291 1037 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 OPLAHO14841 1288 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 MYOGP15173 224 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 TTLL4Q14679 1199 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 SEC23AQ15436 765 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 IMMTQ16891 758 aaKnown RBP21.66■■□□□ 1.06
PRKCB-209ENST00000498058 SLC35G1Q2M3R5 365 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 ASPRV1Q53RT3 343 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 CCDC178Q5BJE1 867 aa21.66■■□□□ 1.06
PRKCB-209ENST00000498058 PPP1R11O60927 126 aaPredicted RBP21.65■■□□□ 1.06
PRKCB-209ENST00000498058 LY6KQ17RY6 165 aa21.65■■□□□ 1.06
PRKCB-209ENST00000498058 FAM47CQ5HY64 1035 aa21.65■■□□□ 1.06
PRKCB-209ENST00000498058 SEPT14Q6ZU15 432 aa21.65■■□□□ 1.06
PRKCB-209ENST00000498058 CTAGE1Q96RT6 745 aa21.65■■□□□ 1.06
PRKCB-209ENST00000498058 GPHNQ9NQX3 736 aaPredicted RBP21.65■■□□□ 1.06
PRKCB-209ENST00000498058 PPP4R2Q9NY27 417 aa21.65■■□□□ 1.06
PRKCB-209ENST00000498058 PARP1P09874 1014 aaKnown RBP21.64■■□□□ 1.05
PRKCB-209ENST00000498058 NT5C2P49902 561 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 ARHGAP1Q07960 439 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 RAB30Q15771 203 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 NFRKBQ6P4R8 1299 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 DEFB128Q7Z7B8 93 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 FBXO11Q86XK2 927 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 RPUSD2Q8IZ73 545 aaKnown RBP21.64■■□□□ 1.05
PRKCB-209ENST00000498058 AFG1LQ8WV93 481 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 KRT23Q9C075 422 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 MSRAQ9UJ68 235 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 TAF6LQ9Y6J9 622 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 TANC1Q9C0D5 1861 aa21.64■■□□□ 1.05
PRKCB-209ENST00000498058 MYH7BA7E2Y1 1941 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 BAZ2BQ9UIF8 2168 aaKnown RBP21.63■■□□□ 1.05
PRKCB-209ENST00000498058 SUPT20HL2P0C7V6 817 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 PPM1EQ8WY54 764 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 KAT2BQ92831 832 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 MTMR8Q96EF0 704 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 RMDN3Q96TC7 470 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 MPHOSPH6Q99547 160 aaKnown RBP21.63■■□□□ 1.05
PRKCB-209ENST00000498058 SENP2Q9HC62 589 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 CTNNA3Q9UI47 895 aa21.63■■□□□ 1.05
PRKCB-209ENST00000498058 DHX16O60231 1041 aaKnown RBP21.62■■□□□ 1.05
PRKCB-209ENST00000498058 MMP3P08254 477 aa21.62■■□□□ 1.05
PRKCB-209ENST00000498058 PTH1RQ03431 593 aa21.62■■□□□ 1.05
PRKCB-209ENST00000498058 TTC22Q5TAA0 569 aa21.62■■□□□ 1.05
PRKCB-209ENST00000498058 NSUN6Q8TEA1 469 aaKnown RBP21.62■■□□□ 1.05
PRKCB-209ENST00000498058 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
PRKCB-209ENST00000498058 MTIF3Q9H2K0 278 aaKnown RBP21.62■■□□□ 1.05
PRKCB-209ENST00000498058 MAD2L2Q9UI95 211 aa21.62■■□□□ 1.05
PRKCB-209ENST00000498058 SLC4A7Q9Y6M7 1214 aa21.62■■□□□ 1.05
PRKCB-209ENST00000498058 RAD50Q92878 1312 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 PTPRSQ13332 1948 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 ZBBXA8MT70 800 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 B4DLN1 442 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 KPNA6O60684 536 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 IQCF3P0C7M6 154 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 EIF2AK2P19525 551 aaKnown RBP21.61■■□□□ 1.05
PRKCB-209ENST00000498058 MRPL12P52815 198 aaKnown RBP21.61■■□□□ 1.05
PRKCB-209ENST00000498058 BRDTQ58F21 947 aaPredicted RBP21.61■■□□□ 1.05
PRKCB-209ENST00000498058 IFIT1BQ5T764 474 aaKnown RBP21.61■■□□□ 1.05
PRKCB-209ENST00000498058 CHST3Q7LGC8 479 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 GAS2L1Q99501 681 aaPredicted RBP21.61■■□□□ 1.05
PRKCB-209ENST00000498058 UBAC1Q9BSL1 405 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 MAF1Q9H063 256 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 CNNM2Q9H8M5 875 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 MRPL11Q9Y3B7 192 aaKnown RBP21.61■■□□□ 1.05
PRKCB-209ENST00000498058 REV3LO60673 3130 aa21.61■■□□□ 1.05
PRKCB-209ENST00000498058 KLRF2D3W0D1 207 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms