RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ACTN4O43707 911 aaKnown RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CYLC1P35663 651 aaPredicted RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 KCNJ6P48051 423 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 ADKP55263 362 aaKnown RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 IGBP1P78318 339 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CXCL9Q07325 125 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CYP4F22Q6NT55 531 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 USP49Q70CQ1 688 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCDC102AQ96A19 550 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 DHX36Q9H2U1 1008 aaKnown RBP8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 DISC1Q9NRI5 854 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 TAB2Q9NYJ8 693 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 ATP6V0A2Q9Y487 856 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 NR2E3Q9Y5X4 410 aa8.9□□□□□ -0.98
HLA-DMB-262ENST00000498020 TOMM70O94826 608 aa8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 ORC2Q13416 577 aaPredicted RBP8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 TMCO3Q6UWJ1 677 aa8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 TBCKQ8TEA7 893 aa8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 ANKS1AQ92625 1134 aa8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 PPP1R13BQ96KQ4 1090 aa8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 RWDD2AQ9UIY3 292 aa8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 FLT1P17948 1338 aa8.9□□□□□ -0.99
HLA-DMB-262ENST00000498020 TECP42680 631 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 MCTP2Q6DN12 878 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 SNX29Q8TEQ0 813 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 TRIM6Q9C030 488 aaPredicted RBP8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 DAGLAQ9Y4D2 1042 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 KCNJ18B7U540 433 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 POTEB2H3BUK9 544 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 HARSP12081 509 aaKnown RBP8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 IL1R1P14778 569 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 SMARCA1P28370 1054 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCZ1BP86790 482 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCZ1P86791 482 aaPredicted RBP8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 KCNJ12Q14500 433 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 BMS1Q14692 1282 aaKnown RBP8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCDC40Q4G0X9 1142 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 UBR2Q8IWV8 1755 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 CHMP2AO43633 222 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 CDC25AP30304 524 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 KRT9P35527 623 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 TBC1D8BQ0IIM8 1120 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 CETN1Q12798 172 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 NCAPHQ15003 741 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 SMYD4Q8IYR2 804 aaPredicted RBP8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 RTFDC1Q9BY42 306 aaPredicted RBP8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 PPP2R2CQ9Y2T4 447 aa8.89□□□□□ -0.99
HLA-DMB-262ENST00000498020 ONECUT3O60422 494 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 TM4SF1P30408 202 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 COPB1P53618 953 aaKnown RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 FAM117BQ6P1L5 589 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 CYP26C1Q6V0L0 522 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 METTL13Q8N6R0 699 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 EHBP1Q8NDI1 1231 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 TSC1Q92574 1164 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 CAMKK2Q96RR4 588 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 NUP58Q9BVL2 599 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 RNF208Q9H0X6 261 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 PSTPIP2Q9H939 334 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 TACC3Q9Y6A5 838 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 TMEM232C9JQI7 657 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 USO1O60763 962 aaKnown RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 GBP2P32456 591 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 PRPHP41219 470 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 KRT83P78385 493 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 UTP14CQ5TAP6 766 aaKnown RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 MFSD14CQ5VZR4 134 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 STYK1Q6J9G0 422 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 ARMCX5Q6P1M9 558 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 ABI1Q8IZP0 508 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 DHTKD1Q96HY7 919 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 CRACR2AQ9BSW2 395 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCDC94Q9BW85 323 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 TMX1Q9H3N1 280 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 KANSL2Q9H9L4 492 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 TUBGCP6Q96RT7 1819 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 TMEM88BA6NKF7 163 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 SMIM22K7EJ46 135 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 ASNSP08243 561 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 HOXA10P31260 410 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 DAGLBQ8NCG7 672 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCSER1Q9C0I3 900 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 PCDHA6Q9UN73 950 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 PCDHA8Q9Y5H6 950 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 MORC2Q9Y6X9 1032 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 PNMA6FA0A0J9YX94 578 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 USP17L5A8MUK1 530 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 HMGCS2P54868 508 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 MAP2K1Q02750 393 aaPredicted RBP8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 CCDC65Q8IXS2 484 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 NT5C3AQ9H0P0 336 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 MYOZ2Q9NPC6 264 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 STK17AQ9UEE5 414 aa8.88□□□□□ -0.99
HLA-DMB-262ENST00000498020 NUP188Q5SRE5 1749 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CEP290O15078 2479 aa8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 GCFC2P16383 781 aaKnown RBP8.87□□□□□ -0.99
HLA-DMB-262ENST00000498020 CASP1P29466 404 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms