RNA–Protein interactions for RNA: ENST00000497824.5

C1orf61-224, Transcript of chromosome 1 open reading frame 61, humanhuman

TSL 1 (best)

Gene C1orf61, Length 725 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-224ENST00000497824 FAM133AQ8N9E0 248 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 PRPF38AQ8NAV1 312 aaKnown RBP4.9□□□□□ -1.63
C1orf61-224ENST00000497824 SLC43A3Q8NBI5 491 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.9□□□□□ -1.63
C1orf61-224ENST00000497824 NUP133Q8WUM0 1156 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 HERVK_113Q902F9 699 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 SNX21Q969T3 373 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 GLT1D1Q96MS3 346 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 KIF2CQ99661 725 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 NOC4LQ9BVI4 516 aaKnown RBP4.9□□□□□ -1.63
C1orf61-224ENST00000497824 TEX13BQ9BXU2 312 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 EPHX3Q9H6B9 360 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 MKNK2Q9HBH9 465 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 SLC38A10Q9HBR0 1119 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 IL23AQ9NPF7 189 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 A1CFQ9NQ94 594 aaKnown RBP4.9□□□□□ -1.63
C1orf61-224ENST00000497824 TRMT13Q9NUP7 481 aaKnown RBP4.9□□□□□ -1.63
C1orf61-224ENST00000497824 CHMP5Q9NZZ3 219 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 NYAP2Q9P242 653 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 NRBP1Q9UHY1 535 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 MTMR7Q9Y216 660 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 GNEQ9Y223 722 aaKnown RBP4.9□□□□□ -1.63
C1orf61-224ENST00000497824 ELP1O95163 1332 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 SYNGAP1Q96PV0 1343 aa4.9□□□□□ -1.63
C1orf61-224ENST00000497824 ATG2AQ2TAZ0 1938 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 A0A0U1RQG5 324 aaPredicted RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 MOXD2PA6NHM9 499 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 IGSF3O75054 1194 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 ZBED4O75132 1171 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 ALAS1P13196 640 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 CST5P28325 142 aaPredicted RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 SLC16A2P36021 539 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 PDE1AP54750 535 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 MRPS5P82675 430 aaKnown RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 CTDSPL2Q05D32 466 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 PPIGQ13427 754 aaKnown RBP eCLIP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 ITGA7Q13683 1181 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 TCTN1Q2MV58 587 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 SBK1Q52WX2 424 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 SLFN13Q68D06 897 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 CCDC174Q6PII3 467 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 CASC1Q6TDU7 716 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 DEFB128Q7Z7B8 93 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 TMEM199Q8N511 208 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 SYMPKQ92797 1274 aaKnown RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 COPS5Q92905 334 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 MKL1Q969V6 931 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 UHRF1Q96T88 793 aaPredicted RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 GAS2L1Q99501 681 aaPredicted RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 USP26Q9BXU7 913 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 LRRCC1Q9C099 1032 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 ABHD16BQ9H3Z7 469 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 HIPK3Q9H422 1215 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 SH2D4AQ9H788 454 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 CD320Q9NPF0 282 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 IL17RBQ9NRM6 502 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 MTMR4Q9NYA4 1195 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 ISY1Q9ULR0 285 aaKnown RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 MUC6Q6W4X9 2439 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 COL4A4P53420 1690 aaPredicted RBP4.89□□□□□ -1.63
C1orf61-224ENST00000497824 ROBO3Q96MS0 1386 aa4.89□□□□□ -1.63
C1orf61-224ENST00000497824 LOXHD1Q8IVV2 1947 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 LCHNA4D1U4 455 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 FAM86C2PA6NEL3 165 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 ZBBXA8MT70 800 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 ATP2A1O14983 1001 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 RNF113AO15541 343 aaKnown RBP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 GPAA1O43292 621 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 RAB11FIP3O75154 756 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 APPP05067 770 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 CA3P07451 260 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 BMP3P12645 472 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 NKX3-2P78367 333 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 TFAP4Q01664 338 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 GPNMBQ14956 572 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 LAPTM4AQ15012 233 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 FSCN1Q16658 493 aaKnown RBP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 PROX2Q3B8N5 592 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 HSP90AB4PQ58FF6 505 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 AKNAD1Q5T1N1 836 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 VPS53Q5VIR6 699 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 TMED8Q6PL24 325 aaPredicted RBP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 KIAA1211Q6ZU35 1233 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 TLK2Q86UE8 772 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 IFNL3Q8IZI9 196 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 ZNF444Q8N0Y2 327 aaPredicted RBP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 KBTBD3Q8NAB2 608 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 PCSK9Q8NBP7 692 aaKnown RBP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 ATXN2LQ8WWM7 1075 aaKnown RBP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 TBC1D5Q92609 795 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 DDX27Q96GQ7 796 aaKnown RBP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 TRERF1Q96PN7 1200 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.88□□□□□ -1.63
C1orf61-224ENST00000497824 OSBPL3Q9H4L5 887 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 SLC28A3Q9HAS3 691 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 GPCPD1Q9NPB8 672 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 RNF146Q9NTX7 359 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 CYP39A1Q9NYL5 469 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 THEGQ9P2T0 379 aa4.88□□□□□ -1.63
C1orf61-224ENST00000497824 MSRAQ9UJ68 235 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms