RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 STAG2Q8N3U4 1231 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 MTG1Q9BT17 334 aaPredicted RBP15.11■□□□□ 0.01
BRPF1-208ENST00000497565 MTMR10Q9NXD2 777 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 PCDHA1Q9Y5I3 950 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 LCTP09848 1927 aa15.11■□□□□ 0.01
BRPF1-208ENST00000497565 MYH6P13533 1939 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 TMEM265A0A087WTH1 108 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 PNMA6FA0A0J9YX94 578 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 MCM5P33992 734 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 GNAQP50148 359 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 HSD17B4P51659 736 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 PTPN11Q06124 597 aaPredicted RBP15.1■□□□□ 0.01
BRPF1-208ENST00000497565 C9orf50Q5SZB4 431 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 RNF20Q5VTR2 975 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 IGDCC4Q8TDY8 1250 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 TMEM87BQ96K49 555 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 RNPC3Q96LT9 517 aaKnown RBP15.1■□□□□ 0.01
BRPF1-208ENST00000497565 TAAR1Q96RJ0 339 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 ESYT1Q9BSJ8 1104 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 STXBP5LQ9Y2K9 1186 aa15.1■□□□□ 0.01
BRPF1-208ENST00000497565 DDAH1O94760 285 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 CFBP00751 764 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 CALM1P0DP23 149 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 CALM2P0DP24 149 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 CALM3P0DP25 149 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 PURAQ00577 322 aaKnown RBP15.09■□□□□ 0.01
BRPF1-208ENST00000497565 ZNF697Q5TEC3 545 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 NFRKBQ6P4R8 1299 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 CCDC62Q6P9F0 684 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 PSRC1Q6PGN9 363 aaPredicted RBP15.09■□□□□ 0.01
BRPF1-208ENST00000497565 STOX1Q6ZVD7 989 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 MB21D2Q8IYB1 491 aaPredicted RBP15.09■□□□□ 0.01
BRPF1-208ENST00000497565 CTCFLQ8NI51 663 aaPredicted RBP15.09■□□□□ 0.01
BRPF1-208ENST00000497565 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
BRPF1-208ENST00000497565 MTIF3Q9H2K0 278 aaKnown RBP15.09■□□□□ 0.01
BRPF1-208ENST00000497565 DDX49Q9Y6V7 483 aaKnown RBP15.09■□□□□ 0.01
BRPF1-208ENST00000497565 LRRC37A2A6NM11 1700 aa15.09■□□□□ 0.01
BRPF1-208ENST00000497565 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.08■□□□□ 0
BRPF1-208ENST00000497565 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.08■□□□□ 0
BRPF1-208ENST00000497565 GH1P01241 217 aa15.08■□□□□ 0
BRPF1-208ENST00000497565 NR3C2P08235 984 aa15.08■□□□□ 0
BRPF1-208ENST00000497565 LIFRP42702 1097 aa15.08■□□□□ 0
BRPF1-208ENST00000497565 RPUSD2Q8IZ73 545 aaKnown RBP15.08■□□□□ 0
BRPF1-208ENST00000497565 TBC1D5Q92609 795 aa15.08■□□□□ 0
BRPF1-208ENST00000497565 ALDH8A1Q9H2A2 487 aaPredicted RBP15.08■□□□□ 0
BRPF1-208ENST00000497565 HIPK3Q9H422 1215 aa15.08■□□□□ 0
BRPF1-208ENST00000497565 PXMP2Q9NR77 195 aa15.08■□□□□ 0
BRPF1-208ENST00000497565 GRIN2DO15399 1336 aa15.08■□□□□ 0
BRPF1-208ENST00000497565 GCOM1H8Y6P7 765 aaPredicted RBP15.07■□□□□ 0
BRPF1-208ENST00000497565 MYL3P08590 195 aa15.07■□□□□ 0
BRPF1-208ENST00000497565 POLR2MP0CAP2 368 aa15.07■□□□□ 0
BRPF1-208ENST00000497565 TGFB3P10600 412 aa15.07■□□□□ 0
BRPF1-208ENST00000497565 NECTIN1Q15223 517 aa15.07■□□□□ 0
BRPF1-208ENST00000497565 EMID1Q96A84 441 aaPredicted RBP15.07■□□□□ 0
BRPF1-208ENST00000497565 SPZ1Q9BXG8 430 aa15.07■□□□□ 0
BRPF1-208ENST00000497565 COL20A1Q9P218 1284 aa15.07■□□□□ 0
BRPF1-208ENST00000497565 CCDC69A6NI79 296 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 PRC1O43663 620 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 B4GALT4O60513 344 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 STAM2O75886 525 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 PFKMP08237 780 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 CASTP20810 708 aaKnown RBP15.06■□□□□ 0
BRPF1-208ENST00000497565 EPHB4P54760 987 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 ANTXR2P58335 489 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 LAMC2Q13753 1193 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 TMEM63BQ5T3F8 832 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 CREB3L3Q68CJ9 461 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 SEPT14Q6ZU15 432 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 CHST3Q7LGC8 479 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 VSIG10LQ86VR7 867 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 HOMER1Q86YM7 354 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 ZNF654Q8IZM8 581 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 RRP36Q96EU6 259 aaKnown RBP15.06■□□□□ 0
BRPF1-208ENST00000497565 PIGSQ96S52 555 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 NOC4LQ9BVI4 516 aaKnown RBP15.06■□□□□ 0
BRPF1-208ENST00000497565 LY9Q9HBG7 655 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 IL23AQ9NPF7 189 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
BRPF1-208ENST00000497565 BAZ2BQ9UIF8 2168 aaKnown RBP15.06■□□□□ 0
BRPF1-208ENST00000497565 OPLAHO14841 1288 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 SLC27A2O14975 620 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 CYTH3O43739 400 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 PPP1R11O60927 126 aaPredicted RBP15.05■□□□□ -0
BRPF1-208ENST00000497565 CSF2RAP15509 400 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 EIF2AK2P19525 551 aaKnown RBP15.05■□□□□ -0
BRPF1-208ENST00000497565 PSMC6P62333 389 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 DGKDQ16760 1214 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 TMEM240Q5SV17 173 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 NFXL1Q6ZNB6 911 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 Q7L0L9 218 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 TEX2Q8IWB9 1127 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.05■□□□□ -03e-9■■■□□ 17.6
BRPF1-208ENST00000497565 PDCD2LQ9BRP1 358 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 KATNAL1Q9BW62 490 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 PPP1R12CQ9BZL4 782 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 TRPV6Q9H1D0 765 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 SEMA6BQ9H3T3 888 aa15.05■□□□□ -0
BRPF1-208ENST00000497565 SEC63Q9UGP8 760 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms