RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 TYW1BQ6NUM6 668 aa23■■□□□ 1.27
CTSD-206ENST00000497544 RAET1EQ8TD07 263 aa23■■□□□ 1.27
CTSD-206ENST00000497544 GLT8D2Q9H1C3 349 aa23■■□□□ 1.27
CTSD-206ENST00000497544 FOXD4L1Q9NU39 408 aa23■■□□□ 1.27
CTSD-206ENST00000497544 OPLAHO14841 1288 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 PGK2P07205 417 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 GJB2P29033 226 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 ANP32AP39687 249 aaKnown RBP22.99■■□□□ 1.27
CTSD-206ENST00000497544 RGS2P41220 211 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 FLT3LGP49771 235 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 ADCY7P51828 1080 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 RPS6P62753 249 aaKnown RBP22.99■■□□□ 1.27
CTSD-206ENST00000497544 FAM177A1Q8N128 213 aaPredicted RBP22.99■■□□□ 1.27
CTSD-206ENST00000497544 ZMYND12Q9H0C1 365 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 RIC8AQ9NPQ8 531 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 GABRQQ9UN88 632 aa22.99■■□□□ 1.27
CTSD-206ENST00000497544 ESYT2A0FGR8 921 aa22.98■■□□□ 1.27
CTSD-206ENST00000497544 SGPL1O95470 568 aa22.98■■□□□ 1.27
CTSD-206ENST00000497544 CYP2B6P20813 491 aa22.98■■□□□ 1.27
CTSD-206ENST00000497544 FOSBP53539 338 aa22.98■■□□□ 1.27
CTSD-206ENST00000497544 UNC93B1Q9H1C4 597 aa22.98■■□□□ 1.27
CTSD-206ENST00000497544 PRUNE2Q8WUY3 3088 aa22.98■■□□□ 1.27
CTSD-206ENST00000497544 DNAJC25-GNG10A0A024R161 153 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 COBLO75128 1261 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 HOXA13P31271 388 aaPredicted RBP22.97■■□□□ 1.27
CTSD-206ENST00000497544 HSD17B4P51659 736 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 PRKCZQ05513 592 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 SLC30A10Q6XR72 485 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 BICD2Q8TD16 824 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 SYTL5Q8TDW5 730 aaPredicted RBP22.97■■□□□ 1.27
CTSD-206ENST00000497544 C8orf76Q96K31 380 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 GUCD1Q96NT3 240 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 TSHZ2Q9NRE2 1034 aa22.97■■□□□ 1.27
CTSD-206ENST00000497544 BIN2Q9UBW5 565 aaPredicted RBP22.97■■□□□ 1.27
CTSD-206ENST00000497544 MUC3AQ02505 3323 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 UBXN2AP68543 259 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 GHRHRQ02643 423 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 ZNF792Q3KQV3 632 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 GALNT17Q6IS24 598 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 USP17L6PQ6QN14 398 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 FCHSD1Q86WN1 690 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 TEX2Q8IWB9 1127 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 TDHQ8IZJ6 230 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 USP6NLQ92738 828 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 ADD3Q9UEY8 706 aaKnown RBP22.96■■□□□ 1.27
CTSD-206ENST00000497544 RAPGEFL1Q9UHV5 662 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 ZMYND8Q9ULU4 1186 aaPredicted RBP22.96■■□□□ 1.27
CTSD-206ENST00000497544 KCNJ14Q9UNX9 436 aa22.96■■□□□ 1.27
CTSD-206ENST00000497544 DIS3Q9Y2L1 958 aaKnown RBP22.96■■□□□ 1.27
CTSD-206ENST00000497544 PIK3CDO00329 1044 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 MEIS2O14770 477 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 CNTN2Q02246 1040 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 UBE2SQ16763 222 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 FAM133AQ8N9E0 248 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 SPRYD3Q8NCJ5 442 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 TAAR1Q96RJ0 339 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 PHF20Q9BVI0 1012 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 GJB4Q9NTQ9 266 aa22.95■■□□□ 1.26
CTSD-206ENST00000497544 TTC28Q96AY4 2481 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 HOXC6P09630 235 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 XRCC5P13010 732 aaKnown RBP22.94■■□□□ 1.26
CTSD-206ENST00000497544 GUCY1B3Q02153 619 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 KRT40Q6A162 431 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 C7orf61Q8IZ16 206 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 DNERQ8NFT8 737 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 NPLOC4Q8TAT6 608 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 APBA2Q99767 749 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 BRMS1Q9HCU9 246 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 PCDHA4Q9UN74 947 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 RBM19Q9Y4C8 960 aaKnown RBP22.94■■□□□ 1.26
CTSD-206ENST00000497544 PLXNA1Q9UIW2 1896 aa22.94■■□□□ 1.26
CTSD-206ENST00000497544 SPDYE3A6NKU9 549 aa22.93■■□□□ 1.26
CTSD-206ENST00000497544 IRF5Q13568 498 aa22.93■■□□□ 1.26
CTSD-206ENST00000497544 SAFBQ15424 915 aaKnown RBP eCLIP22.93■■□□□ 1.26
CTSD-206ENST00000497544 LARP1BQ659C4 914 aaKnown RBP22.93■■□□□ 1.26
CTSD-206ENST00000497544 MCTP2Q6DN12 878 aa22.93■■□□□ 1.26
CTSD-206ENST00000497544 BLIDQ8IZY5 108 aa22.93■■□□□ 1.26
CTSD-206ENST00000497544 PURBQ96QR8 312 aaKnown RBP22.93■■□□□ 1.26
CTSD-206ENST00000497544 RMDN3Q96TC7 470 aa22.93■■□□□ 1.26
CTSD-206ENST00000497544 DAXXQ9UER7 740 aaPredicted RBP22.93■■□□□ 1.26
CTSD-206ENST00000497544 LAMA2P24043 3122 aaKnown RBP22.93■■□□□ 1.26
CTSD-206ENST00000497544 SOWAHBA6NEL2 793 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 B4DLN1 442 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 FOSP01100 380 aaPredicted RBP22.92■■□□□ 1.26
CTSD-206ENST00000497544 PDCP20941 246 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 MAGEA10P43363 369 aaPredicted RBP22.92■■□□□ 1.26
CTSD-206ENST00000497544 ARHGEF16Q5VV41 709 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 TRMT44Q8IYL2 757 aaKnown RBP22.92■■□□□ 1.26
CTSD-206ENST00000497544 REXO1Q8N1G1 1221 aaKnown RBP22.92■■□□□ 1.26
CTSD-206ENST00000497544 DAGLBQ8NCG7 672 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 NSUN6Q8TEA1 469 aaKnown RBP22.92■■□□□ 1.26
CTSD-206ENST00000497544 MAML3Q96JK9 1138 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 MPHOSPH6Q99547 160 aaKnown RBP22.92■■□□□ 1.26
CTSD-206ENST00000497544 COL20A1Q9P218 1284 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 ZNF236Q9UL36 1845 aa22.92■■□□□ 1.26
CTSD-206ENST00000497544 H3BQV1 296 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 ADCY3O60266 1144 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 MMP1P03956 469 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 JAKMIP3Q5VZ66 844 aa22.91■■□□□ 1.26
CTSD-206ENST00000497544 ZNF467Q7Z7K2 595 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms