RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 RAD50Q92878 1312 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 ABHD14A-ACY1A0A1B0GW23 586 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 RBM47A0AV96 593 aaKnown RBP12.45□□□□□ -0.42
TOM1-217ENST00000497448 TMEM232C9JQI7 657 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 ALDH5A1P51649 535 aaPredicted RBP12.45□□□□□ -0.42
TOM1-217ENST00000497448 RBL2Q08999 1139 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 PTGISQ16647 500 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 SLFN13Q68D06 897 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 NSMFQ6X4W1 530 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 BMP8AQ7Z5Y6 402 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 ERC1Q8IUD2 1116 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 RNF135Q8IUD6 432 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 MKL1Q969V6 931 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 PRRX2Q99811 253 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 ALG13Q9NP73 1137 aaKnown RBP12.45□□□□□ -0.42
TOM1-217ENST00000497448 CLDND1Q9NY35 253 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
TOM1-217ENST00000497448 SYNPO2Q9UMS6 1093 aa12.45□□□□□ -0.42
TOM1-217ENST00000497448 PLIN4Q96Q06 1357 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 A6NJR5 290 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 EFCAB14O75071 495 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 LTBRP36941 435 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 SNAP25P60880 206 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 PPP2R5BQ15173 497 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 SMAD2Q15796 467 aaKnown RBP12.44□□□□□ -0.42
TOM1-217ENST00000497448 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
TOM1-217ENST00000497448 GDF6Q6KF10 455 aaPredicted RBP12.44□□□□□ -0.42
TOM1-217ENST00000497448 RPAINQ86UA6 219 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 SP7Q8TDD2 431 aaPredicted RBP12.44□□□□□ -0.42
TOM1-217ENST00000497448 EDAQ92838 391 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 COPS5Q92905 334 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 POP1Q99575 1024 aaKnown RBP12.44□□□□□ -0.42
TOM1-217ENST00000497448 NSUN3Q9H649 340 aaKnown RBP12.44□□□□□ -0.42
TOM1-217ENST00000497448 PAG1Q9NWQ8 432 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 MTMR4Q9NYA4 1195 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 INSL6Q9Y581 213 aa12.44□□□□□ -0.42
TOM1-217ENST00000497448 DMDP11532 3685 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 TMEM221A6NGB7 291 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 M0R296 226 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 KPNA6O60684 536 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 PARNO95453 639 aaKnown RBP12.43□□□□□ -0.42
TOM1-217ENST00000497448 TTLL1O95922 423 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 CKBP12277 381 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 CHMP4BP1P59074 171 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 HTRA4P83105 476 aaPredicted RBP12.43□□□□□ -0.42
TOM1-217ENST00000497448 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
TOM1-217ENST00000497448 CLUL1Q15846 466 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOM1-217ENST00000497448 FAM160B2Q86V87 743 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 SESTD1Q86VW0 696 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 PBXIP1Q96AQ6 731 aa12.43□□□□□ -0.42
TOM1-217ENST00000497448 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOM1-217ENST00000497448 PUS7LQ9H0K6 701 aaKnown RBP12.43□□□□□ -0.42
TOM1-217ENST00000497448 SPTBN4Q9H254 2564 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 H3BNC9 293 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 NKRFO15226 690 aaKnown RBP eCLIP12.42□□□□□ -0.42
TOM1-217ENST00000497448 MBTPS2O43462 519 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 PRDM1O75626 825 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
TOM1-217ENST00000497448 GPM6BQ13491 265 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 IKBKEQ14164 716 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 UBE3CQ15386 1083 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 CEP85Q6P2H3 762 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 TRIM67Q6ZTA4 783 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 RASGRP2Q7LDG7 609 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 SUGP1Q8IWZ8 645 aaKnown RBP12.42□□□□□ -0.42
TOM1-217ENST00000497448 MYOCDQ8IZQ8 938 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 CHURC1Q8WUH1 139 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 STAG1Q8WVM7 1258 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 CHMP4CQ96CF2 233 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 GMCL1Q96IK5 515 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 SAMD11Q96NU1 681 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 ADD3Q9UEY8 706 aaKnown RBP12.42□□□□□ -0.42
TOM1-217ENST00000497448 CCPG1Q9ULG6 757 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 MYO7AQ13402 2215 aa12.42□□□□□ -0.42
TOM1-217ENST00000497448 LOC102724159A0A0B4J2E5 919 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 MINDY4BA8MYZ0 360 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 DLX2Q07687 328 aaPredicted RBP12.41□□□□□ -0.42
TOM1-217ENST00000497448 BAATQ14032 418 aaPredicted RBP12.41□□□□□ -0.42
TOM1-217ENST00000497448 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 PWP2Q15269 919 aaKnown RBP12.41□□□□□ -0.42
TOM1-217ENST00000497448 PKN1Q16512 942 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 SLC30A10Q6XR72 485 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 EPB41L4AQ9HCS5 686 aaPredicted RBP12.41□□□□□ -0.42
TOM1-217ENST00000497448 CACNA1HO95180 2353 aa12.41□□□□□ -0.42
TOM1-217ENST00000497448 VPS13AQ96RL7 3174 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 NFIBO00712 420 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 PLA2G6O60733 806 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 TBX10O75333 385 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 ARIH2O95376 493 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 SLC1A4P43007 532 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 VCPP55072 806 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms