RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 KIFC2Q96AC6 838 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 ALG13Q9NP73 1137 aaKnown RBP11.65□□□□□ -0.54
SRSF4-205ENST00000497015 A1CFQ9NQ94 594 aaKnown RBP11.65□□□□□ -0.54
SRSF4-205ENST00000497015 MTUS1Q9ULD2 1270 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 BRWD1Q9NSI6 2320 aa11.65□□□□□ -0.54
SRSF4-205ENST00000497015 COL4A4P53420 1690 aaPredicted RBP11.65□□□□□ -0.55
SRSF4-205ENST00000497015 TET1Q8NFU7 2136 aa11.65□□□□□ -0.55
SRSF4-205ENST00000497015 KIF28PB7ZC32 967 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 SUPT20HL2P0C7V6 817 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 ACTN1P12814 892 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 PDE1AP54750 535 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 WDR5P61964 334 aaKnown RBP11.64□□□□□ -0.55
SRSF4-205ENST00000497015 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 NBPF20Q3BBV1 942 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
SRSF4-205ENST00000497015 FTOQ9C0B1 505 aaKnown RBP eCLIP11.64□□□□□ -0.55
SRSF4-205ENST00000497015 HOMER2Q9NSB8 354 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 ATP8A2Q9NTI2 1148 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
SRSF4-205ENST00000497015 IGKV6D-41A0A0C4DH26 115 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 LINC01553A4QN01 128 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 H3BQ06 376 aaPredicted RBP11.63□□□□□ -0.55
SRSF4-205ENST00000497015 ZEB2O60315 1214 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 MBD4O95243 580 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 RASA1P20936 1047 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 RFC2P35250 354 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 ZP2Q05996 745 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 MORC4Q8TE76 937 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 CLIP2Q9UDT6 1046 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 FBXO40Q9UH90 709 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 C5orf42Q9H799 3197 aa11.63□□□□□ -0.55
SRSF4-205ENST00000497015 ASB14A6NK59 587 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 IRS1P35568 1242 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 MUM1L1Q5H9M0 696 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 KIAA1211Q6ZU35 1233 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 STK11IPQ8N1F8 1099 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 APPBP2Q92624 585 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 MKL1Q969V6 931 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 EVI5LQ96CN4 794 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 C17orf80Q9BSJ5 609 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 ZNF318Q5VUA4 2279 aa11.62□□□□□ -0.55
SRSF4-205ENST00000497015 PITPNM1O00562 1244 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 RNF113AO15541 343 aaKnown RBP11.61□□□□□ -0.55
SRSF4-205ENST00000497015 ST18O60284 1047 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 BAIAP3O94812 1187 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 GJB5O95377 273 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 MYL3P08590 195 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 LTBRP36941 435 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 OAZ1P54368 228 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 SNAP25P60880 206 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 IRX6P78412 446 aaPredicted RBP11.61□□□□□ -0.55
SRSF4-205ENST00000497015 TCF15Q12870 199 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 COL19A1Q14993 1142 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 ERICH6BQ5W0A0 696 aa11.61□□□□□ -0.55
SRSF4-205ENST00000497015 OTUD7AQ8TE49 926 aaPredicted RBP11.61□□□□□ -0.55
SRSF4-205ENST00000497015 TGS1Q96RS0 853 aaKnown RBP11.61□□□□□ -0.55
SRSF4-205ENST00000497015 GREB1LQ9C091 1923 aaPredicted RBP11.6□□□□□ -0.55
SRSF4-205ENST00000497015 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
SRSF4-205ENST00000497015 A6NJR5 290 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 NBNO60934 754 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 GNAT2P19087 354 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 B4GALNT3Q6L9W6 998 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 GIMAP6Q6P9H5 292 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 RETREG2Q8NC44 543 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 DHX38Q92620 1227 aaKnown RBP11.6□□□□□ -0.55
SRSF4-205ENST00000497015 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 RAD9AQ99638 391 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 ACAD9Q9H845 621 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 RNF146Q9NTX7 359 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 CYP39A1Q9NYL5 469 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 FEM1BQ9UK73 627 aa11.6□□□□□ -0.55
SRSF4-205ENST00000497015 NEFLP07196 543 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 FAM47CQ5HY64 1035 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 TSHZ3Q63HK5 1081 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 NFRKBQ6P4R8 1299 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 TRAF7Q6Q0C0 670 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.59□□□□□ -0.553e-7■■■□□ 16.8
SRSF4-205ENST00000497015 COPS5Q92905 334 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 CHMP4CQ96CF2 233 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 MTG1Q9BT17 334 aaPredicted RBP11.59□□□□□ -0.55
SRSF4-205ENST00000497015 ZBED2Q9BTP6 218 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 FSD1Q9BTV5 496 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 WDR11Q9BZH6 1224 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 PUS7LQ9H0K6 701 aaKnown RBP11.59□□□□□ -0.55
SRSF4-205ENST00000497015 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 MUTYHQ9UIF7 546 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 SLC4A4Q9Y6R1 1079 aa11.59□□□□□ -0.55
SRSF4-205ENST00000497015 TMEM232C9JQI7 657 aa11.58□□□□□ -0.56
SRSF4-205ENST00000497015 CXCL10P02778 98 aa11.58□□□□□ -0.56
SRSF4-205ENST00000497015 DLX2Q07687 328 aaPredicted RBP11.58□□□□□ -0.56
SRSF4-205ENST00000497015 PUS10Q3MIT2 529 aaKnown RBP11.58□□□□□ -0.56
SRSF4-205ENST00000497015 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
SRSF4-205ENST00000497015 FAM117BQ6P1L5 589 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms