RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 HAUS3Q68CZ6 603 aa9.77□□□□□ -0.84
U2AF1-212ENST00000496462 RNF180Q86T96 592 aa9.77□□□□□ -0.84
U2AF1-212ENST00000496462 EXOC8Q8IYI6 725 aa9.77□□□□□ -0.84
U2AF1-212ENST00000496462 TEKT3Q9BXF9 490 aa9.77□□□□□ -0.84
U2AF1-212ENST00000496462 ABHD16BQ9H3Z7 469 aa9.77□□□□□ -0.84
U2AF1-212ENST00000496462 AKAP11Q9UKA4 1901 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 KPNA6O60684 536 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 GAS7O60861 476 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 EIF3JO75822 258 aaKnown RBP9.77□□□□□ -0.85
U2AF1-212ENST00000496462 GRK4P32298 578 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 RRP1BQ14684 758 aaKnown RBP9.77□□□□□ -0.85
U2AF1-212ENST00000496462 SEPT14Q6ZU15 432 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
U2AF1-212ENST00000496462 SSC5DA1L4H1 1573 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 UBA7P41226 1012 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 USP11P51784 963 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 KRT79Q5XKE5 535 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 SCLT1Q96NL6 688 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 TBC1D22BQ9NU19 505 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 KCNG1Q9UIX4 513 aa9.77□□□□□ -0.85
U2AF1-212ENST00000496462 PPFIA3O75145 1194 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 NR3C2P08235 984 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 RPS6P62753 249 aaKnown RBP9.76□□□□□ -0.85
U2AF1-212ENST00000496462 TMEM132BQ14DG7 1078 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 FBXO18Q8NFZ0 1043 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 JPH2Q9BR39 696 aaPredicted RBP9.76□□□□□ -0.85
U2AF1-212ENST00000496462 CPVLQ9H3G5 476 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 PSME4Q14997 1843 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 CNTNAP5Q8WYK1 1306 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 LAD1O00515 517 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 CCNT1O60563 726 aaKnown RBP9.76□□□□□ -0.85
U2AF1-212ENST00000496462 FLT3LGP49771 235 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 TTC38Q5R3I4 469 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 DTHD1Q6ZMT9 781 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 PCSK9Q8NBP7 692 aaKnown RBP9.76□□□□□ -0.85
U2AF1-212ENST00000496462 NAV1Q8NEY1 1877 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 GH1P01241 217 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 GNAT1P11488 350 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 AKR1A1P14550 325 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 CDC27P30260 824 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 ME1P48163 572 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 GPAT2Q6NUI2 795 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 GLG1Q92896 1179 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 RBPJLQ9UBG7 517 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 KCNJ14Q9UNX9 436 aa9.76□□□□□ -0.85
U2AF1-212ENST00000496462 TLR3O15455 904 aaKnown RBP9.75□□□□□ -0.85
U2AF1-212ENST00000496462 FIBPO43427 364 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 TFRCP02786 760 aaKnown RBP9.75□□□□□ -0.85
U2AF1-212ENST00000496462 HOXA13P31271 388 aaPredicted RBP9.75□□□□□ -0.85
U2AF1-212ENST00000496462 CALCRLQ16602 461 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 TMEM132AQ24JP5 1023 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 FBXO46Q6PJ61 603 aaPredicted RBP9.75□□□□□ -0.85
U2AF1-212ENST00000496462 C17orf99Q6UX52 265 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 PTPN18Q99952 460 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 KATNAL1Q9BW62 490 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 NRBP2Q9NSY0 501 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 MIS18BP1Q6P0N0 1132 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 RSPH3Q86UC2 560 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 NOSTRINQ8IVI9 506 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 KCNG4Q8TDN1 519 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 ATP6V0A1Q93050 837 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 MYH1P12882 1939 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 M0QZ92 97 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 NEMFO60524 1076 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 MMP1P03956 469 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 ZSCAN22P10073 491 aaPredicted RBP9.75□□□□□ -0.85
U2AF1-212ENST00000496462 CPT1AP50416 773 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 AMPD3Q01432 767 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 PRR16Q569H4 304 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 IQSEC1Q6DN90 963 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 OTUD6AQ7L8S5 288 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 MIER3Q7Z3K6 550 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 FERMT3Q86UX7 667 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 IL17RAQ96F46 866 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 SPATA32Q96LK8 384 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 TINF2Q9BSI4 451 aa9.75□□□□□ -0.85
U2AF1-212ENST00000496462 DDX25Q9UHL0 483 aaKnown RBP9.75□□□□□ -0.85
U2AF1-212ENST00000496462 SMIM22K7EJ46 135 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 JAK2O60674 1132 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 TXNP10599 105 aaKnown RBP9.74□□□□□ -0.85
U2AF1-212ENST00000496462 TGFB3P10600 412 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 KRT76Q01546 638 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 EVX2Q03828 476 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 MTMR1Q13613 665 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 LAMC2Q13753 1193 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 GPRASP2Q96D09 838 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 ZNF577Q9BSK1 485 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 ZMYND12Q9H0C1 365 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 TAF6LQ9Y6J9 622 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 MYH7P12883 1935 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 NOVP48745 357 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 DNM2P50570 870 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 ARHGAP4P98171 946 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 TNFAIP2Q03169 654 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 NCBP1Q09161 790 aaKnown RBP9.74□□□□□ -0.85
U2AF1-212ENST00000496462 TPRNQ4KMQ1 711 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 ZNF467Q7Z7K2 595 aaPredicted RBP9.74□□□□□ -0.85
U2AF1-212ENST00000496462 FAM167AQ96KS9 214 aa9.74□□□□□ -0.85
U2AF1-212ENST00000496462 FAM20AQ96MK3 541 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms