RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 MRPL12P52815 198 aaKnown RBP16.79■□□□□ 0.28
CXCL12-208ENST00000496375 PURAQ00577 322 aaKnown RBP16.79■□□□□ 0.28
CXCL12-208ENST00000496375 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 ADGRF4Q8IZF3 695 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 RGS22Q8NE09 1264 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 SCFD2Q8WU76 684 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 HERVK_113Q902F9 699 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 COPS5Q92905 334 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 ZNF576Q9H609 170 aa16.79■□□□□ 0.28
CXCL12-208ENST00000496375 GPHNQ9NQX3 736 aaPredicted RBP16.79■□□□□ 0.28
CXCL12-208ENST00000496375 MYH6P13533 1939 aa16.78■□□□□ 0.28
CXCL12-208ENST00000496375 ABCB11O95342 1321 aa16.78■□□□□ 0.28
CXCL12-208ENST00000496375 NKRFO15226 690 aaKnown RBP eCLIP16.78■□□□□ 0.28
CXCL12-208ENST00000496375 FGBP02675 491 aa16.78■□□□□ 0.28
CXCL12-208ENST00000496375 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-208ENST00000496375 TBC1D5Q92609 795 aa16.78■□□□□ 0.28
CXCL12-208ENST00000496375 MTG1Q9BT17 334 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-208ENST00000496375 COL25A1Q9BXS0 654 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-208ENST00000496375 KRT23Q9C075 422 aa16.78■□□□□ 0.28
CXCL12-208ENST00000496375 WNT8AQ9H1J5 351 aa16.78■□□□□ 0.28
CXCL12-208ENST00000496375 MTIF3Q9H2K0 278 aaKnown RBP16.78■□□□□ 0.28
CXCL12-208ENST00000496375 TRMT13Q9NUP7 481 aaKnown RBP16.78■□□□□ 0.28
CXCL12-208ENST00000496375 CXXC1Q9P0U4 656 aaPredicted RBP16.78■□□□□ 0.28
CXCL12-208ENST00000496375 CHD9Q3L8U1 2897 aa16.78■□□□□ 0.28
CXCL12-208ENST00000496375 SCN10AQ9Y5Y9 1956 aa16.77■□□□□ 0.28
CXCL12-208ENST00000496375 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.28
CXCL12-208ENST00000496375 TXNP10599 105 aaKnown RBP16.77■□□□□ 0.28
CXCL12-208ENST00000496375 QRICH1Q2TAL8 776 aa16.77■□□□□ 0.28
CXCL12-208ENST00000496375 OTOP2Q7RTS6 562 aa16.77■□□□□ 0.28
CXCL12-208ENST00000496375 MAP4K1Q92918 833 aa16.77■□□□□ 0.28
CXCL12-208ENST00000496375 UBAC1Q9BSL1 405 aa16.77■□□□□ 0.28
CXCL12-208ENST00000496375 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.28
CXCL12-208ENST00000496375 DHX16O60231 1041 aaKnown RBP16.76■□□□□ 0.27
CXCL12-208ENST00000496375 ARIH2O95376 493 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 SUPT20HL2P0C7V6 817 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 CYP2C9P11712 490 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 PTH1RQ03431 593 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 TTLL4Q14679 1199 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 SYTL5Q8TDW5 730 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-208ENST00000496375 SCLYQ96I15 445 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 TAAR1Q96RJ0 339 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 MAF1Q9H063 256 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 LSG1Q9H089 658 aaKnown RBP16.76■□□□□ 0.27
CXCL12-208ENST00000496375 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
CXCL12-208ENST00000496375 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-208ENST00000496375 SPTBN5Q9NRC6 3674 aaKnown RBP16.75■□□□□ 0.27
CXCL12-208ENST00000496375 A6NJR5 290 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 KPNA6O60684 536 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 NBPF20Q3BBV1 942 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 FAM47CQ5HY64 1035 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 IFIT1BQ5T764 474 aaKnown RBP16.75■□□□□ 0.27
CXCL12-208ENST00000496375 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 FBXO11Q86XK2 927 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 MCF2L2Q86YR7 1114 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 RPUSD2Q8IZ73 545 aaKnown RBP16.75■□□□□ 0.27
CXCL12-208ENST00000496375 PPP1R13LQ8WUF5 828 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 JMJD4Q9H9V9 463 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 COL20A1Q9P218 1284 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 MSRAQ9UJ68 235 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
CXCL12-208ENST00000496375 GBF1Q92538 1859 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 MYO9BQ13459 2157 aa16.75■□□□□ 0.27
CXCL12-208ENST00000496375 RAB30Q15771 203 aa16.74■□□□□ 0.27
CXCL12-208ENST00000496375 NFRKBQ6P4R8 1299 aa16.74■□□□□ 0.27
CXCL12-208ENST00000496375 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
CXCL12-208ENST00000496375 STAG2Q8N3U4 1231 aa16.74■□□□□ 0.27
CXCL12-208ENST00000496375 NSUN6Q8TEA1 469 aaKnown RBP16.74■□□□□ 0.27
CXCL12-208ENST00000496375 VWCEQ96DN2 955 aa16.74■□□□□ 0.27
CXCL12-208ENST00000496375 CHD7Q9P2D1 2997 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 KIAA1217Q5T5P2 1943 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 ZBBXA8MT70 800 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 CYP21A2P08686 494 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 SEC23AQ15436 765 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 STXBP2Q15833 593 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 LY6KQ17RY6 165 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 CCDC62Q6P9F0 684 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 CYB5R4Q7L1T6 521 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 IWS1Q96ST2 819 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 GAS2L1Q99501 681 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-208ENST00000496375 NKX2-4Q9H2Z4 354 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 SCN5AQ14524 2016 aa16.73■□□□□ 0.27
CXCL12-208ENST00000496375 KLRF2D3W0D1 207 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 CFBP00751 764 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 EIF2AK2P19525 551 aaKnown RBP16.72■□□□□ 0.27
CXCL12-208ENST00000496375 CHMP4BP1P59074 171 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 PTPN11Q06124 597 aaPredicted RBP16.72■□□□□ 0.27
CXCL12-208ENST00000496375 ARHGEF16Q5VV41 709 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 DEFB128Q7Z7B8 93 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 USP38Q8NB14 1042 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 AFG1LQ8WV93 481 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 AMNQ9BXJ7 453 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 PRDM12Q9H4Q4 367 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 YBX2Q9Y2T7 364 aaKnown RBP16.72■□□□□ 0.27
CXCL12-208ENST00000496375 RBM8AQ9Y5S9 174 aaKnown RBP16.72■□□□□ 0.27
CXCL12-208ENST00000496375 SLC4A7Q9Y6M7 1214 aa16.72■□□□□ 0.27
CXCL12-208ENST00000496375 EPB41L2O43491 1005 aaKnown RBP16.71■□□□□ 0.27
CXCL12-208ENST00000496375 GH1P01241 217 aa16.71■□□□□ 0.27
CXCL12-208ENST00000496375 PFKMP08237 780 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms