RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 PDE4DQ08499 809 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 TRIM29Q14134 588 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 PWP2Q15269 919 aaKnown RBP11.1□□□□□ -0.63
PRPF3-207ENST00000496202 ARHGEF16Q5VV41 709 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 TEX2Q8IWB9 1127 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 FAM184AQ8NB25 1140 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 BICD2Q8TD16 824 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 NSUN6Q8TEA1 469 aaKnown RBP11.1□□□□□ -0.63
PRPF3-207ENST00000496202 TBC1D5Q92609 795 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 RMDN3Q96TC7 470 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 TINF2Q9BSI4 451 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 RIC8AQ9NPQ8 531 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 SH3GLB2Q9NR46 395 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 FLRT1Q9NZU1 646 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 VPS54Q9P1Q0 977 aa11.1□□□□□ -0.63
PRPF3-207ENST00000496202 SYNGAP1Q96PV0 1343 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 ESYT2A0FGR8 921 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 SPDYE3A6NKU9 549 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 JAK2O60674 1132 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 EIF2AK2P19525 551 aaKnown RBP11.09□□□□□ -0.63
PRPF3-207ENST00000496202 CNGA1P29973 690 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 FOSBP53539 338 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 ST3GAL1Q11201 340 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 UBE2SQ16763 222 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 MCTP2Q6DN12 878 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 ARMCX2Q7L311 632 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 FAM177A1Q8N128 213 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-207ENST00000496202 REXO1Q8N1G1 1221 aaKnown RBP11.09□□□□□ -0.63
PRPF3-207ENST00000496202 RNF25Q96BH1 459 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-207ENST00000496202 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 FGD4Q96M96 766 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 AIFM3Q96NN9 605 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 TAAR1Q96RJ0 339 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 PXMP2Q9NR77 195 aa11.09□□□□□ -0.63
PRPF3-207ENST00000496202 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-207ENST00000496202 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.09□□□□□ -0.63
PRPF3-207ENST00000496202 K7ELQ4 463 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-207ENST00000496202 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 DTNBO60941 627 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 FOSP01100 380 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-207ENST00000496202 CCL5P13501 91 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-207ENST00000496202 TRIM32Q13049 653 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 AP3B2Q13367 1082 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 MAMDC4Q6UXC1 1216 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 ABHD8Q96I13 439 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 ZNF333Q96JL9 665 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 PURBQ96QR8 312 aaKnown RBP11.08□□□□□ -0.64
PRPF3-207ENST00000496202 IWS1Q96ST2 819 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 ZMYND12Q9H0C1 365 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 BRMS1Q9HCU9 246 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 HMX1Q9NP08 348 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-207ENST00000496202 COL20A1Q9P218 1284 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 NRBP1Q9UHY1 535 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 ZHX1Q9UKY1 873 aaPredicted RBP11.08□□□□□ -0.64
PRPF3-207ENST00000496202 SMC3Q9UQE7 1217 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 HTTP42858 3142 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 RPTORQ8N122 1335 aa11.08□□□□□ -0.64
PRPF3-207ENST00000496202 LRRC37A2A6NM11 1700 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 MEIS2O14770 477 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 GTPBP6O43824 516 aaPredicted RBP11.07□□□□□ -0.64
PRPF3-207ENST00000496202 HSP90AA1P07900 732 aaKnown RBP11.07□□□□□ -0.64
PRPF3-207ENST00000496202 MYCLP12524 364 aaPredicted RBP11.07□□□□□ -0.64
PRPF3-207ENST00000496202 CCND2P30279 289 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 STXBP2Q15833 593 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 PRAMEF19Q5SWL8 479 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 GALNT17Q6IS24 598 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 EEPD1Q7L9B9 569 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 SNX21Q969T3 373 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 PDCD2LQ9BRP1 358 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.07□□□□□ -0.64
PRPF3-207ENST00000496202 RNF208Q9H0X6 261 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 UNC93B1Q9H1C4 597 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 ABHD16BQ9H3Z7 469 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 VTA1Q9NP79 307 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 ASTN1O14525 1302 aa11.07□□□□□ -0.64
PRPF3-207ENST00000496202 KIAA1217Q5T5P2 1943 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
PRPF3-207ENST00000496202 NR3C2P08235 984 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 CYBAP13498 195 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 FDPSP14324 419 aaKnown RBP11.06□□□□□ -0.64
PRPF3-207ENST00000496202 ACVR2BQ13705 512 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 PGM5Q15124 567 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 MTFR1Q15390 333 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 SAFBQ15424 915 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRPF3-207ENST00000496202 MAP3K21Q5TCX8 1036 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 JAKMIP3Q5VZ66 844 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 FBXO16Q8IX29 292 aaPredicted RBP11.06□□□□□ -0.64
PRPF3-207ENST00000496202 BLIDQ8IZY5 108 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 MORC4Q8TE76 937 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 C8orf76Q96K31 380 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 ANO3Q9BYT9 981 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 FAM184BQ9ULE4 1060 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 PCDHA6Q9UN73 950 aa11.06□□□□□ -0.64
PRPF3-207ENST00000496202 PCDHA4Q9UN74 947 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms