RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 PLXNA3P51805 1871 aa12.23□□□□□ -0.45
C9orf78-207ENST00000495934 TMEM221A6NGB7 291 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 M0R296 226 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 PRKAB2O43741 272 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 CPT1AP50416 773 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 TTF1Q15361 905 aaPredicted RBP12.22□□□□□ -0.45
C9orf78-207ENST00000495934 PKN1Q16512 942 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 DUSP28Q4G0W2 176 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 TCEAL5Q5H9L2 206 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 CNKSR3Q6P9H4 555 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 CCDC155Q8N6L0 562 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 BANK1Q8NDB2 785 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
C9orf78-207ENST00000495934 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 ATP8A2Q9NTI2 1148 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 RNF146Q9NTX7 359 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 CLDND1Q9NY35 253 aa12.22□□□□□ -0.45
C9orf78-207ENST00000495934 ATG2AQ2TAZ0 1938 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 NLRC5Q86WI3 1866 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 SALL3Q9BXA9 1300 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 GPNMBQ14956 572 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 COL19A1Q14993 1142 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 SMAD2Q15796 467 aaKnown RBP12.21□□□□□ -0.45
C9orf78-207ENST00000495934 TRIM67Q6ZTA4 783 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 ERMP1Q7Z2K6 904 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 CAGE1Q8TC20 777 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 AFAP1L1Q8TED9 768 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 ATOH1Q92858 354 aaPredicted RBP12.21□□□□□ -0.45
C9orf78-207ENST00000495934 NYAP2Q9P242 653 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 FEM1BQ9UK73 627 aa12.21□□□□□ -0.45
C9orf78-207ENST00000495934 GVINP1Q7Z2Y8 2422 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 ABHD14A-ACY1A0A1B0GW23 586 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 MBD4O95243 580 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 IFIT2P09913 472 aaKnown RBP12.2□□□□□ -0.46
C9orf78-207ENST00000495934 NUCB1Q02818 461 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
C9orf78-207ENST00000495934 CLUL1Q15846 466 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 TCTN1Q2MV58 587 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 ANKRD45Q5TZF3 282 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 OR6J1Q8NGC5 347 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 BCL11AQ9H165 835 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 NSUN3Q9H649 340 aaKnown RBP12.2□□□□□ -0.46
C9orf78-207ENST00000495934 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
C9orf78-207ENST00000495934 INSL6Q9Y581 213 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 CACNA1GO43497 2377 aa12.2□□□□□ -0.46
C9orf78-207ENST00000495934 EPG5Q9HCE0 2579 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 EFCAB14O75071 495 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 CXCL10P02778 98 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 SELPP16109 830 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 ATP5JP18859 108 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 PTGISQ16647 500 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 EPC2Q52LR7 807 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
C9orf78-207ENST00000495934 TSHZ3Q63HK5 1081 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 RPAINQ86UA6 219 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 FBXL6Q8N531 539 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 WDR11Q9BZH6 1224 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 DMXL1Q9Y485 3027 aa12.19□□□□□ -0.46
C9orf78-207ENST00000495934 RAD50Q92878 1312 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 MBTPS2O43462 519 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 NBNO60934 754 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 ABCB7O75027 752 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 PARNO95453 639 aaKnown RBP12.18□□□□□ -0.46
C9orf78-207ENST00000495934 FDX1P10109 184 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 ALAS1P13196 640 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 LTBRP36941 435 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 CHMP4BP1P59074 171 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 IKBKEQ14164 716 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 TKFCQ3LXA3 575 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 MORC4Q8TE76 937 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 IRF2BPLQ9H1B7 796 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 CYP39A1Q9NYL5 469 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
C9orf78-207ENST00000495934 TPRP12270 2363 aaKnown RBP12.17□□□□□ -0.46
C9orf78-207ENST00000495934 H3BNC9 293 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 STXBP3O00186 592 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 GOLIM4O00461 696 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 NCK2O43639 380 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 KPNA6O60684 536 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 RASA1P20936 1047 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 VCPP55072 806 aaKnown RBP12.17□□□□□ -0.46
C9orf78-207ENST00000495934 GPM6BQ13491 265 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 MUM1L1Q5H9M0 696 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 CTR9Q6PD62 1173 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 NSMFQ6X4W1 530 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 CHD1LQ86WJ1 897 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 PI4K2BQ8TCG2 481 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 DHX38Q92620 1227 aaKnown RBP12.17□□□□□ -0.46
C9orf78-207ENST00000495934 SAMD11Q96NU1 681 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 PURBQ96QR8 312 aaKnown RBP12.17□□□□□ -0.46
C9orf78-207ENST00000495934 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 DNAJC2Q99543 621 aaKnown RBP12.17□□□□□ -0.46
C9orf78-207ENST00000495934 LNPKQ9C0E8 428 aa12.17□□□□□ -0.46
C9orf78-207ENST00000495934 ECHDC1Q9NTX5 307 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms