RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 PPM1GO15355 546 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-207ENST00000495817 TBX1O43435 398 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 NPHS1O60500 1241 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 MED14OSP0DP75 135 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 FGFR1P11362 822 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 PLS3P13797 630 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 YBX3P16989 372 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC39-207ENST00000495817 GFRA1P56159 465 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 PPP2R2AP63151 447 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 KCNAB2Q13303 367 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 KIR3DS1Q14943 382 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 PTPROQ16827 1216 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 TKFCQ3LXA3 575 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 SYDE1Q6ZW31 735 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-207ENST00000495817 CABP7Q86V35 215 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 SCUBE1Q8IWY4 988 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 ZCRB1Q8TBF4 217 aaKnown RBP8.36□□□□□ -1.07
CCDC39-207ENST00000495817 KISS1RQ969F8 398 aaPredicted RBP8.36□□□□□ -1.07
CCDC39-207ENST00000495817 DHRS4Q9BTZ2 278 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 LGR4Q9BXB1 951 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 SPC25Q9HBM1 224 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 CLEC1BQ9P126 229 aa8.36□□□□□ -1.07
CCDC39-207ENST00000495817 DNAJC6O75061 913 aa8.35□□□□□ -1.07
CCDC39-207ENST00000495817 CYBBP04839 570 aa8.35□□□□□ -1.07
CCDC39-207ENST00000495817 MSL3P1P0C860 447 aa8.35□□□□□ -1.07
CCDC39-207ENST00000495817 CBX2Q14781 532 aaPredicted RBP8.35□□□□□ -1.07
CCDC39-207ENST00000495817 FRS2Q8WU20 508 aa8.35□□□□□ -1.07
CCDC39-207ENST00000495817 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
CCDC39-207ENST00000495817 CDC6Q99741 560 aa8.35□□□□□ -1.07
CCDC39-207ENST00000495817 NFIBO00712 420 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 RFPL3O75679 317 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 MAP4K2Q12851 820 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 RAB3GAP1Q15042 981 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 FOXB2Q5VYV0 432 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 BICRALQ6AI39 1079 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 PAQR3Q6TCH7 311 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 FILIP1Q7Z7B0 1213 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 LZTR1Q8N653 840 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 EXOC2Q96KP1 924 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 KRTAP4-12Q9BQ66 201 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 GPRC5CQ9NQ84 441 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 IFT57Q9NWB7 429 aa8.34□□□□□ -1.07
CCDC39-207ENST00000495817 TRBV23-1A0A0A0MS06 115 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 MYOCOSA0A1B0GUC4 107 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 C7orf72A4D263 438 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 MEFVO15553 781 aaPredicted RBP8.33□□□□□ -1.08
CCDC39-207ENST00000495817 TMEM253P0C7T8 217 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 MAPKAPK2P49137 400 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 CYP4F3Q08477 520 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 DALRD3Q5D0E6 543 aaKnown RBP8.33□□□□□ -1.08
CCDC39-207ENST00000495817 CPNE8Q86YQ8 564 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 KCTD13Q8WZ19 329 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
CCDC39-207ENST00000495817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC39-207ENST00000495817 MRPS23Q9Y3D9 190 aaKnown RBP8.33□□□□□ -1.08
CCDC39-207ENST00000495817 PLD2O14939 933 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 DBHP09172 617 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 GLI4P10075 376 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 PABPC1P11940 636 aaKnown RBP8.32□□□□□ -1.08
CCDC39-207ENST00000495817 IBSPP21815 317 aaPredicted RBP8.32□□□□□ -1.08
CCDC39-207ENST00000495817 ECI1P42126 302 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 RAP1GAPP47736 663 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 KCNJ6P48051 423 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 GTF2A2P52657 109 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 FAM209AQ5JX71 171 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 RPTNQ6XPR3 784 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 NETO2Q8NC67 525 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 C1orf159Q96HA4 380 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 GPATCH3Q96I76 525 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 NCOA5Q9HCD5 579 aaKnown RBP8.32□□□□□ -1.08
CCDC39-207ENST00000495817 KLHL14Q9P2G3 628 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 CD2APQ9Y5K6 639 aa8.32□□□□□ -1.08
CCDC39-207ENST00000495817 NUDT19A8MXV4 375 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 MYO1BO43795 1136 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 SDHBP21912 280 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 TACR1P25103 407 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 VIPR1P32241 457 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 MASP1P48740 699 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 SUMO1P63165 101 aaKnown RBP8.31□□□□□ -1.08
CCDC39-207ENST00000495817 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
CCDC39-207ENST00000495817 PLEKHN1Q494U1 663 aaPredicted RBP8.31□□□□□ -1.08
CCDC39-207ENST00000495817 FNDC3BQ53EP0 1204 aaKnown RBP8.31□□□□□ -1.08
CCDC39-207ENST00000495817 SLC35F1Q5T1Q4 408 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 YOD1Q5VVQ6 348 aaPredicted RBP8.31□□□□□ -1.08
CCDC39-207ENST00000495817 MBLAC2Q68D91 279 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 TMEM132EQ6IEE7 984 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 NSMFQ6X4W1 530 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 PPIL6Q8IXY8 311 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 TMEM145Q8NBT3 493 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 KREMEN2Q8NCW0 462 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 DIO2Q92813 273 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 KCNN1Q92952 543 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 NINJ1Q92982 152 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 OSBP2Q969R2 916 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 MTA3Q9BTC8 594 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 MRPL4Q9BYD3 311 aaKnown RBP8.31□□□□□ -1.08
CCDC39-207ENST00000495817 SIRT5Q9NXA8 310 aa8.31□□□□□ -1.08
CCDC39-207ENST00000495817 TCAF2A6NFQ2 919 aa8.3□□□□□ -1.08
CCDC39-207ENST00000495817 ETV2O00321 342 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms