RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 PRAMEF19Q5SWL8 479 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 ARHGEF16Q5VV41 709 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 SMARCC2Q8TAQ2 1214 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 ZSCAN31Q96LW9 406 aaPredicted RBP23.06■■□□□ 1.28
LMO4-204ENST00000495705 IWS1Q96ST2 819 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 GLT8D2Q9H1C3 349 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 DDX20Q9UHI6 824 aaKnown RBP23.06■■□□□ 1.28
LMO4-204ENST00000495705 ZHX1Q9UKY1 873 aaPredicted RBP23.06■■□□□ 1.28
LMO4-204ENST00000495705 STK36Q9NRP7 1315 aa23.06■■□□□ 1.28
LMO4-204ENST00000495705 POTEFA5A3E0 1075 aa23.05■■□□□ 1.28
LMO4-204ENST00000495705 PDE4DQ08499 809 aa23.05■■□□□ 1.28
LMO4-204ENST00000495705 VTA1Q9NP79 307 aa23.05■■□□□ 1.28
LMO4-204ENST00000495705 PXMP2Q9NR77 195 aa23.05■■□□□ 1.28
LMO4-204ENST00000495705 ESYT2A0FGR8 921 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 MEIS2O14770 477 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 AKR1A1P14550 325 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 TYW1BQ6NUM6 668 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 USP17L6PQ6QN14 398 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 NECAB1Q8N987 351 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 CCDC148Q8NFR7 591 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 KATNBL1Q9H079 304 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 CRISPLD2Q9H0B8 497 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 SH2B1Q9NRF2 756 aaPredicted RBP23.04■■□□□ 1.28
LMO4-204ENST00000495705 FAM184BQ9ULE4 1060 aa23.04■■□□□ 1.28
LMO4-204ENST00000495705 PPFIA3O75145 1194 aa23.03■■□□□ 1.28
LMO4-204ENST00000495705 CAPN15O75808 1086 aa23.03■■□□□ 1.28
LMO4-204ENST00000495705 EIF2AK2P19525 551 aaKnown RBP23.03■■□□□ 1.28
LMO4-204ENST00000495705 ADCY7P51828 1080 aa23.03■■□□□ 1.28
LMO4-204ENST00000495705 FCHSD1Q86WN1 690 aa23.03■■□□□ 1.28
LMO4-204ENST00000495705 RIC8AQ9NPQ8 531 aa23.03■■□□□ 1.28
LMO4-204ENST00000495705 SH3GLB2Q9NR46 395 aa23.03■■□□□ 1.28
LMO4-204ENST00000495705 FRMPD4Q14CM0 1322 aa23.03■■□□□ 1.28
LMO4-204ENST00000495705 SMCO2A6NFE2 343 aa23.02■■□□□ 1.28
LMO4-204ENST00000495705 MCM2P49736 904 aa23.02■■□□□ 1.28
LMO4-204ENST00000495705 LHX8Q68G74 356 aa23.02■■□□□ 1.28
LMO4-204ENST00000495705 FBXO16Q8IX29 292 aaPredicted RBP23.02■■□□□ 1.28
LMO4-204ENST00000495705 FAM177A1Q8N128 213 aaPredicted RBP23.02■■□□□ 1.28
LMO4-204ENST00000495705 PDCD2LQ9BRP1 358 aa23.02■■□□□ 1.28
LMO4-204ENST00000495705 ZMYND12Q9H0C1 365 aa23.02■■□□□ 1.28
LMO4-204ENST00000495705 TFRCP02786 760 aaKnown RBP23.01■■□□□ 1.27
LMO4-204ENST00000495705 NR3C2P08235 984 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 RARBP10826 455 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 STXBP2Q15833 593 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 CCDC144BQ3MJ40 725 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 SHISA4Q96DD7 197 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 C6orf50Q9HD87 102 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 OGDHLQ9ULD0 1010 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 DDX49Q9Y6V7 483 aaKnown RBP23.01■■□□□ 1.27
LMO4-204ENST00000495705 KIAA1217Q5T5P2 1943 aa23.01■■□□□ 1.27
LMO4-204ENST00000495705 BRCA2P51587 3418 aa23■■□□□ 1.27
LMO4-204ENST00000495705 SPDYE3A6NKU9 549 aa23■■□□□ 1.27
LMO4-204ENST00000495705 CTDNEP1O95476 244 aa23■■□□□ 1.27
LMO4-204ENST00000495705 EN2P19622 333 aaPredicted RBP23■■□□□ 1.27
LMO4-204ENST00000495705 GNA11P29992 359 aa23■■□□□ 1.27
LMO4-204ENST00000495705 PGM5Q15124 567 aa23■■□□□ 1.27
LMO4-204ENST00000495705 EEPD1Q7L9B9 569 aa23■■□□□ 1.27
LMO4-204ENST00000495705 ANKLE1Q8NAG6 615 aa23■■□□□ 1.27
LMO4-204ENST00000495705 WASF1Q92558 559 aa23■■□□□ 1.27
LMO4-204ENST00000495705 EHMT1Q9H9B1 1298 aa23■■□□□ 1.27
LMO4-204ENST00000495705 FOSP01100 380 aaPredicted RBP22.99■■□□□ 1.27
LMO4-204ENST00000495705 CCND2P30279 289 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 AP3B2Q13367 1082 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 UBE2SQ16763 222 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 MCTP2Q6DN12 878 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 IQSEC1Q6DN90 963 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 TAPT1Q6NXT6 567 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 NSUN7Q8NE18 718 aaKnown RBP22.99■■□□□ 1.27
LMO4-204ENST00000495705 BICD2Q8TD16 824 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 VPS54Q9P1Q0 977 aa22.99■■□□□ 1.27
LMO4-204ENST00000495705 ORC3Q9UBD5 711 aaPredicted RBP22.99■■□□□ 1.27
LMO4-204ENST00000495705 EIF3JO75822 258 aaKnown RBP22.98■■□□□ 1.27
LMO4-204ENST00000495705 XBP1P17861 261 aa22.98■■□□□ 1.27
LMO4-204ENST00000495705 TNFAIP2Q03169 654 aa22.98■■□□□ 1.27
LMO4-204ENST00000495705 ST3GAL1Q11201 340 aa22.98■■□□□ 1.27
LMO4-204ENST00000495705 IFFO2Q5TF58 517 aa22.98■■□□□ 1.27
LMO4-204ENST00000495705 XRRA1Q6P2D8 792 aa22.98■■□□□ 1.27
LMO4-204ENST00000495705 VSIG10LQ86VR7 867 aa22.98■■□□□ 1.27
LMO4-204ENST00000495705 CCDC83Q8IWF9 413 aa22.98■■□□□ 1.27
LMO4-204ENST00000495705 LLPHQ9BRT6 129 aaKnown RBP22.98■■□□□ 1.27
LMO4-204ENST00000495705 RBM47A0AV96 593 aaKnown RBP22.97■■□□□ 1.27
LMO4-204ENST00000495705 DUSP11O75319 330 aaKnown RBP22.97■■□□□ 1.27
LMO4-204ENST00000495705 STAM2O75886 525 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 ADCYAP1R1P41586 468 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 CLK2P49760 499 aaKnown RBP22.97■■□□□ 1.27
LMO4-204ENST00000495705 ANO1Q5XXA6 986 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 SCFD2Q8WU76 684 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 XPNPEP3Q9NQH7 507 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 PDGFCQ9NRA1 345 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 PCDHA6Q9UN73 950 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 PCDHA8Q9Y5H6 950 aa22.97■■□□□ 1.27
LMO4-204ENST00000495705 MYCLP12524 364 aaPredicted RBP22.96■■□□□ 1.27
LMO4-204ENST00000495705 NLRP5P59047 1200 aa22.96■■□□□ 1.27
LMO4-204ENST00000495705 REXO1Q8N1G1 1221 aaKnown RBP22.96■■□□□ 1.27
LMO4-204ENST00000495705 ARRDC4Q8NCT1 418 aa22.96■■□□□ 1.27
LMO4-204ENST00000495705 IL31RAQ8NI17 732 aa22.96■■□□□ 1.27
LMO4-204ENST00000495705 CD2BP2O95400 341 aaKnown RBP22.95■■□□□ 1.26
LMO4-204ENST00000495705 TTLL4Q14679 1199 aa22.95■■□□□ 1.26
LMO4-204ENST00000495705 DUSP28Q4G0W2 176 aa22.95■■□□□ 1.26
LMO4-204ENST00000495705 PCNX4Q63HM2 1172 aa22.95■■□□□ 1.26
LMO4-204ENST00000495705 GALNT17Q6IS24 598 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms