RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 CYP2C9P11712 490 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 NBPF20Q3BBV1 942 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 ANKS1AQ92625 1134 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 SYMPKQ92797 1274 aaKnown RBP17.27■□□□□ 0.36
PTPN18-216ENST00000495400 COPS5Q92905 334 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 CPVLQ9H3G5 476 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 SLC28A3Q9HAS3 691 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 SLC4A7Q9Y6M7 1214 aa17.27■□□□□ 0.36
PTPN18-216ENST00000495400 ABCB11O95342 1321 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 KIAA1217Q5T5P2 1943 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 A6NJR5 290 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 PFKMP08237 780 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 TTLL4Q14679 1199 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 CDC37Q16543 378 aaPredicted RBP17.26■□□□□ 0.35
PTPN18-216ENST00000495400 NFRKBQ6P4R8 1299 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 VWCEQ96DN2 955 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 DSCC1Q9BVC3 393 aa17.26■□□□□ 0.35
PTPN18-216ENST00000495400 PRUNE2Q8WUY3 3088 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 ZBBXA8MT70 800 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 B4E1Z4 1266 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 PTPN11Q06124 597 aaPredicted RBP17.25■□□□□ 0.35
PTPN18-216ENST00000495400 ASPRV1Q53RT3 343 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 FAM47CQ5HY64 1035 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 PPM1EQ8WY54 764 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 TBC1D5Q92609 795 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
PTPN18-216ENST00000495400 ZSWIM5Q9P217 1185 aa17.25■□□□□ 0.35
PTPN18-216ENST00000495400 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
PTPN18-216ENST00000495400 ARIH2O95376 493 aa17.24■□□□□ 0.35
PTPN18-216ENST00000495400 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
PTPN18-216ENST00000495400 DEFB128Q7Z7B8 93 aa17.24■□□□□ 0.35
PTPN18-216ENST00000495400 MCF2L2Q86YR7 1114 aa17.24■□□□□ 0.35
PTPN18-216ENST00000495400 ENAHQ8N8S7 591 aaPredicted RBP17.24■□□□□ 0.35
PTPN18-216ENST00000495400 TAAR1Q96RJ0 339 aa17.24■□□□□ 0.35
PTPN18-216ENST00000495400 KRT23Q9C075 422 aa17.24■□□□□ 0.35
PTPN18-216ENST00000495400 CTNNA3Q9UI47 895 aa17.24■□□□□ 0.35
PTPN18-216ENST00000495400 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
PTPN18-216ENST00000495400 TRIP12Q14669 1992 aaPredicted RBP17.24■□□□□ 0.35
PTPN18-216ENST00000495400 RFC2P35250 354 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 RABGGTBP53611 331 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 ADGRE1Q14246 886 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 QRICH1Q2TAL8 776 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 TJAP1Q5JTD0 557 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 SYTL5Q8TDW5 730 aaPredicted RBP17.23■□□□□ 0.35
PTPN18-216ENST00000495400 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
PTPN18-216ENST00000495400 IWS1Q96ST2 819 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 PRDM6Q9NQX0 595 aa17.23■□□□□ 0.35
PTPN18-216ENST00000495400 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
PTPN18-216ENST00000495400 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 PITPNM1O00562 1244 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 DHX16O60231 1041 aaKnown RBP17.22■□□□□ 0.35
PTPN18-216ENST00000495400 GH1P01241 217 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 PARP1P09874 1014 aaKnown RBP17.22■□□□□ 0.35
PTPN18-216ENST00000495400 ACTN1P12814 892 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 ATP2A2P16615 1042 aaKnown RBP17.22■□□□□ 0.35
PTPN18-216ENST00000495400 IGFBP4P22692 258 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 STXBP2Q15833 593 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 SEPT14Q6ZU15 432 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 FBXO11Q86XK2 927 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 EXOC6Q8TAG9 804 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 PPP1R13LQ8WUF5 828 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 CNNM2Q9H8M5 875 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 JMJD4Q9H9V9 463 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 TANC1Q9C0D5 1861 aa17.22■□□□□ 0.35
PTPN18-216ENST00000495400 MYOGP15173 224 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 BFSP2Q13515 415 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 RMDN3Q96TC7 470 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 COL20A1Q9P218 1284 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 NOD1Q9Y239 953 aa17.21■□□□□ 0.35
PTPN18-216ENST00000495400 CHD9Q3L8U1 2897 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 MMP3P08254 477 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 IQCF3P0C7M6 154 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 CHMP4BP1P59074 171 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 ARHGAP1Q07960 439 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 CCDC85BQ15834 202 aaPredicted RBP17.2■□□□□ 0.34
PTPN18-216ENST00000495400 ARHGEF16Q5VV41 709 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 ATXN2LQ8WWM7 1075 aaKnown RBP17.2■□□□□ 0.34
PTPN18-216ENST00000495400 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
PTPN18-216ENST00000495400 TET1Q8NFU7 2136 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 TTC28Q96AY4 2481 aa17.2■□□□□ 0.34
PTPN18-216ENST00000495400 CASTP20810 708 aaKnown RBP17.19■□□□□ 0.34
PTPN18-216ENST00000495400 PTGISQ16647 500 aa17.19■□□□□ 0.34
PTPN18-216ENST00000495400 TMEM67Q5HYA8 995 aa17.19■□□□□ 0.34
PTPN18-216ENST00000495400 IFIT1BQ5T764 474 aaKnown RBP17.19■□□□□ 0.34
PTPN18-216ENST00000495400 CHST3Q7LGC8 479 aa17.19■□□□□ 0.34
PTPN18-216ENST00000495400 CCDC155Q8N6L0 562 aa17.19■□□□□ 0.34
PTPN18-216ENST00000495400 AMNQ9BXJ7 453 aa17.19■□□□□ 0.34
PTPN18-216ENST00000495400 FTOQ9C0B1 505 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPN18-216ENST00000495400 THEGQ9P2T0 379 aa17.19■□□□□ 0.34
PTPN18-216ENST00000495400 VCANP13611 3396 aa17.18■□□□□ 0.34
PTPN18-216ENST00000495400 KLRF2D3W0D1 207 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms