RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 CLCN1P35523 988 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 LONP1P36776 959 aaKnown RBP18.45■□□□□ 0.54
CBX4-204ENST00000495122 PRPHP41219 470 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 NAPAP54920 295 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 SLC35G1Q2M3R5 365 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 CERKLQ49MI3 558 aaPredicted RBP18.45■□□□□ 0.54
CBX4-204ENST00000495122 PIK3AP1Q6ZUJ8 805 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 CLIC6Q96NY7 704 aa18.45■□□□□ 0.54
CBX4-204ENST00000495122 ASCC2Q9H1I8 757 aaPredicted RBP18.45■□□□□ 0.54
CBX4-204ENST00000495122 IKBKBO14920 756 aa18.44■□□□□ 0.54
CBX4-204ENST00000495122 MSNP26038 577 aaKnown RBP18.44■□□□□ 0.54
CBX4-204ENST00000495122 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
CBX4-204ENST00000495122 BACE1P56817 501 aa18.44■□□□□ 0.54
CBX4-204ENST00000495122 NT5DC1Q5TFE4 455 aa18.44■□□□□ 0.54
CBX4-204ENST00000495122 USP17L2Q6R6M4 530 aa18.44■□□□□ 0.54
CBX4-204ENST00000495122 LUZP1Q86V48 1076 aa18.44■□□□□ 0.54
CBX4-204ENST00000495122 CLIP2Q9UDT6 1046 aa18.44■□□□□ 0.54
CBX4-204ENST00000495122 DACH1Q9UI36 760 aa18.44■□□□□ 0.54
CBX4-204ENST00000495122 PNMA6FA0A0J9YX94 578 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 FLT3LGP49771 235 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 SEMA3FQ13275 785 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 IRF5Q13568 498 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 EARS2Q5JPH6 523 aaKnown RBP18.43■□□□□ 0.54
CBX4-204ENST00000495122 MCTP2Q6DN12 878 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 GMCL1P1Q8NEA9 526 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 GPKOWQ92917 476 aaPredicted RBP eCLIP18.43■□□□□ 0.54
CBX4-204ENST00000495122 CSRNP2Q9H175 543 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 TMOD4Q9NZQ9 345 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 PCDHA6Q9UN73 950 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 ZKSCAN5Q9Y2L8 839 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 PCDHA8Q9Y5H6 950 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 ZNF236Q9UL36 1845 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 PLXNA1Q9UIW2 1896 aa18.43■□□□□ 0.54
CBX4-204ENST00000495122 FAM205CA6NFA0 338 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 C19orf81C9J6K1 198 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 ADCY3O60266 1144 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 SMC2O95347 1197 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 CCL5P13501 91 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 TXLNAP40222 546 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 PTGDRQ13258 359 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 DHX8Q14562 1220 aaKnown RBP18.42■□□□□ 0.54
CBX4-204ENST00000495122 NONOQ15233 471 aaKnown RBP eCLIP18.42■□□□□ 0.541e-9■■■□□ 18.4
CBX4-204ENST00000495122 C11orf57Q6ZUT1 292 aaPredicted RBP18.42■□□□□ 0.54
CBX4-204ENST00000495122 MTMR8Q96EF0 704 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 MRFAP1L1Q96HT8 127 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 MORF4L1Q9UBU8 362 aa18.42■□□□□ 0.54
CBX4-204ENST00000495122 SMCO2A6NFE2 343 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 USP17L10C9JJH3 530 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 MPHOSPH10O00566 681 aaKnown RBP18.41■□□□□ 0.54
CBX4-204ENST00000495122 GH2P01242 217 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 SLFN14P0C7P3 912 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 ATP2B1P20020 1258 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 HOXA7P31268 230 aaPredicted RBP18.41■□□□□ 0.54
CBX4-204ENST00000495122 UBXN2AP68543 259 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 MDM2Q00987 491 aaPredicted RBP18.41■□□□□ 0.54
CBX4-204ENST00000495122 TRAF1Q13077 416 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 POSTNQ15063 836 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 ZNF174Q15697 407 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 LONRF3Q496Y0 759 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 PLA2G4DQ86XP0 818 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 PXYLP1Q8TE99 480 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 GMCL1Q96IK5 515 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 PIGSQ96S52 555 aa18.41■□□□□ 0.54
CBX4-204ENST00000495122 NAP1L4Q99733 375 aaKnown RBP18.41■□□□□ 0.54
CBX4-204ENST00000495122 BAZ2BQ9UIF8 2168 aaKnown RBP18.41■□□□□ 0.54
CBX4-204ENST00000495122 POLR2DO15514 142 aaKnown RBP18.4■□□□□ 0.54
CBX4-204ENST00000495122 ACTN4O43707 911 aaKnown RBP18.4■□□□□ 0.54
CBX4-204ENST00000495122 GJB1P08034 283 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 ELNP15502 786 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 GJA8P48165 433 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
CBX4-204ENST00000495122 ABCB5Q2M3G0 1257 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 TYW1BQ6NUM6 668 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 DHX40Q8IX18 779 aaKnown RBP18.4■□□□□ 0.54
CBX4-204ENST00000495122 REXO1Q8N1G1 1221 aaKnown RBP18.4■□□□□ 0.54
CBX4-204ENST00000495122 LRRC47Q8N1G4 583 aaKnown RBP18.4■□□□□ 0.54
CBX4-204ENST00000495122 SPATA20Q8TB22 786 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 COA7Q96BR5 231 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 AK8Q96MA6 479 aa18.4■□□□□ 0.54
CBX4-204ENST00000495122 ZBTB5O15062 677 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 INHAP05111 366 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 ZNF75DP51815 510 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 ADCY7P51828 1080 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 ICA1Q05084 483 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 C4orf32Q8N8J7 132 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 IQUBQ8NA54 791 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 MLKLQ8NB16 471 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 PIBF1Q8WXW3 757 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 RNF208Q9H0X6 261 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 UNC93B1Q9H1C4 597 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 EMILIN3Q9NT22 766 aa18.39■□□□□ 0.53
CBX4-204ENST00000495122 BIN2Q9UBW5 565 aaPredicted RBP18.39■□□□□ 0.53
CBX4-204ENST00000495122 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
CBX4-204ENST00000495122 MYL1P05976 194 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 SARSP49591 514 aaKnown RBP18.38■□□□□ 0.53
CBX4-204ENST00000495122 HERVK_113P62684 666 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 CCDC96Q2M329 555 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 SH3RF1Q7Z6J0 888 aa18.38■□□□□ 0.53
CBX4-204ENST00000495122 NEK8Q86SG6 692 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms