RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 RGMBQ6NW40 437 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 SHC4Q6S5L8 630 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 DTHD1Q6ZMT9 781 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 SAPCD2Q86UD0 394 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 RASAL3Q86YV0 1011 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 RIOX2Q8IUF8 465 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 BRI3BPQ8WY22 251 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 CLIC6Q96NY7 704 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 HOMER2Q9NSB8 354 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 FAM13BQ9NYF5 915 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 TMEM63CQ9P1W3 806 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 FBXO40Q9UH90 709 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 RIPK3Q9Y572 518 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 MRVI1Q9Y6F6 885 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 FRMPD4Q14CM0 1322 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 RPTORQ8N122 1335 aa12.51□□□□□ -0.41
PKP4-215ENST00000494945 A0A1B0GVL5 298 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
PKP4-215ENST00000494945 PDHXO00330 501 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 TDP2O95551 362 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 SLC25A27O95847 323 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 PFKFB1P16118 471 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
PKP4-215ENST00000494945 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
PKP4-215ENST00000494945 CALCRLQ16602 461 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 Q4G0T1 1027 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 POTEDQ86YR6 584 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
PKP4-215ENST00000494945 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 SYTL5Q8TDW5 730 aaPredicted RBP12.5□□□□□ -0.41
PKP4-215ENST00000494945 SPATC1LQ9H0A9 340 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 CSRNP2Q9H175 543 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 GOLPH3LQ9H4A5 285 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 DACT1Q9NYF0 836 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 BTBD7Q9P203 1132 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
PKP4-215ENST00000494945 HPSEQ9Y251 543 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 TLL2Q9Y6L7 1015 aa12.5□□□□□ -0.41
PKP4-215ENST00000494945 PFASO15067 1338 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 VWA3AA6NCI4 1184 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 MANSC4A6NHS7 340 aaPredicted RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 BTBD19C9JJ37 291 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 TBX3O15119 743 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 SLC37A4O43826 429 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 KINO60870 393 aaKnown RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 NR1I2O75469 434 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 CNMDO75829 334 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 LETM1O95202 739 aaPredicted RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 GCLCP48506 637 aaPredicted RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 NDUFA8P51970 172 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 RPS6P62753 249 aaKnown RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 GRIN1Q05586 938 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 FSTL1Q12841 308 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 MKRN3Q13064 507 aaKnown RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 SNW1Q13573 536 aaKnown RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 NSMFQ6X4W1 530 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.49□□□□□ -0.41
PKP4-215ENST00000494945 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 AK8Q96MA6 479 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 MTMR9Q96QG7 549 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 PAGR1Q9BTK6 254 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 NUP62CLQ9H1M0 184 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 ZCCHC17Q9NP64 241 aaKnown RBP12.49□□□□□ -0.41
PKP4-215ENST00000494945 RBPJLQ9UBG7 517 aa12.49□□□□□ -0.41
PKP4-215ENST00000494945 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 SLC10A3P09131 477 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 ZNF76P36508 570 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 SYKP43405 635 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 FXR2P51116 673 aaKnown RBP eCLIP12.48□□□□□ -0.41
PKP4-215ENST00000494945 BAATQ14032 418 aaPredicted RBP12.48□□□□□ -0.41
PKP4-215ENST00000494945 IL17AQ16552 155 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 TMEM266Q2M3C6 531 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 ZSCAN23Q3MJ62 389 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 SLC30A10Q6XR72 485 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 SHCBP1Q8NEM2 672 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
PKP4-215ENST00000494945 CCDC102AQ96A19 550 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 TIGD1Q96MW7 591 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 PARK7Q99497 189 aaKnown RBP12.48□□□□□ -0.41
PKP4-215ENST00000494945 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
PKP4-215ENST00000494945 RAB34Q9BZG1 259 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 GZF1Q9H116 711 aaPredicted RBP12.48□□□□□ -0.41
PKP4-215ENST00000494945 CLSTN2Q9H4D0 955 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 CYP39A1Q9NYL5 469 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 COL20A1Q9P218 1284 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 KCNH3Q9ULD8 1083 aa12.48□□□□□ -0.41
PKP4-215ENST00000494945 CTAGE5O15320 804 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 ZNF202O95125 648 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 TXLNAP40222 546 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 INHBEP58166 350 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 ERVK-9P63128 1117 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 ERVK-24P63145 666 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 SETQ01105 290 aaPredicted RBP12.47□□□□□ -0.41
PKP4-215ENST00000494945 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
PKP4-215ENST00000494945 XRRA1Q6P2D8 792 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms