RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 LRRC2Q9BYS8 371 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 ZMYND15Q9H091 742 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 RIOX1Q9H6W3 641 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 JMJD4Q9H9V9 463 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 HMX1Q9NP08 348 aaPredicted RBP10.22□□□□□ -0.77
ITGB1-217ENST00000494395 HOMER2Q9NSB8 354 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 SLC5A4Q9NY91 659 aa10.22□□□□□ -0.77
ITGB1-217ENST00000494395 NFIBO00712 420 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-217ENST00000494395 SLC4A3P48751 1232 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 CNTN2Q02246 1040 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 CDC37Q16543 378 aaPredicted RBP10.21□□□□□ -0.77
ITGB1-217ENST00000494395 QRICH1Q2TAL8 776 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 MFSD14CQ5VZR4 134 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 MAMDC4Q6UXC1 1216 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 DHX32Q7L7V1 743 aaKnown RBP10.21□□□□□ -0.77
ITGB1-217ENST00000494395 TMTC2Q8N394 836 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 TCEANC2Q96MN5 208 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 DEFB118Q96PH6 123 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 MYL10Q9BUA6 226 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 CYP39A1Q9NYL5 469 aa10.21□□□□□ -0.77
ITGB1-217ENST00000494395 ALPK3Q96L96 1907 aa10.21□□□□□ -0.78
ITGB1-217ENST00000494395 OPLAHO14841 1288 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 PFASO15067 1338 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 SNAI1O95863 264 aaPredicted RBP10.2□□□□□ -0.78
ITGB1-217ENST00000494395 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
ITGB1-217ENST00000494395 CPA1P15085 419 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 CAPN2P17655 700 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
ITGB1-217ENST00000494395 APOA5Q6Q788 366 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 CATIPQ7Z7H3 387 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 ANKRD35Q8N283 1001 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 FBXL16Q8N461 479 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 MSL3Q8N5Y2 521 aaKnown RBP10.2□□□□□ -0.78
ITGB1-217ENST00000494395 DDX11Q96FC9 970 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 SYNGAP1Q96PV0 1343 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 TINF2Q9BSI4 451 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 SPZ1Q9BXG8 430 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 LIMD1Q9UGP4 676 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 NRBP1Q9UHY1 535 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 PNMA2Q9UL42 364 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 BRPF3Q9ULD4 1205 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 VPS9D1Q9Y2B5 631 aa10.2□□□□□ -0.78
ITGB1-217ENST00000494395 NID2Q14112 1375 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 CCDC69A6NI79 296 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 ZBTB5O15062 677 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 ZNF865P0CJ78 1059 aaPredicted RBP10.19□□□□□ -0.78
ITGB1-217ENST00000494395 SMARCA1P28370 1054 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 GHRHRQ02643 423 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 MLLT1Q03111 559 aaPredicted RBP10.19□□□□□ -0.78
ITGB1-217ENST00000494395 PRAMEF19Q5SWL8 479 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 SLC30A10Q6XR72 485 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 SRBD1Q8N5C6 995 aaKnown RBP10.19□□□□□ -0.78
ITGB1-217ENST00000494395 MORC4Q8TE76 937 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 IL17RAQ96F46 866 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 JAKMIP1Q96N16 626 aaKnown RBP10.19□□□□□ -0.78
ITGB1-217ENST00000494395 MAF1Q9H063 256 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 KATNBL1Q9H079 304 aa10.19□□□□□ -0.78
ITGB1-217ENST00000494395 ABCB11O95342 1321 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 SEPT4O43236 478 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 PLEKHA8P1O95397 391 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 CALM1P0DP23 149 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 CALM2P0DP24 149 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 CALM3P0DP25 149 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 RXRAP19793 462 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 RPS6KB1P23443 525 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 KIF5BP33176 963 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 RCAN1P53805 252 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 BAATQ14032 418 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-217ENST00000494395 USH1GQ495M9 461 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 BLOC1S2Q6QNY1 142 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 NSMFQ6X4W1 530 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 NFXL1Q6ZNB6 911 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 ARMCX2Q7L311 632 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 FBXO11Q86XK2 927 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 CTCFLQ8NI51 663 aaPredicted RBP10.18□□□□□ -0.78
ITGB1-217ENST00000494395 NUP133Q8WUM0 1156 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 TBC1D5Q92609 795 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 HS3ST6Q96QI5 342 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 PURBQ96QR8 312 aaKnown RBP10.18□□□□□ -0.78
ITGB1-217ENST00000494395 PIGSQ96S52 555 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 VAT1LQ9HCJ6 419 aa10.18□□□□□ -0.78
ITGB1-217ENST00000494395 DDX20Q9UHI6 824 aaKnown RBP10.18□□□□□ -0.78
ITGB1-217ENST00000494395 PNMA6FA0A0J9YX94 578 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 MSCO60682 206 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 CASTP20810 708 aaKnown RBP10.17□□□□□ -0.78
ITGB1-217ENST00000494395 EDNRBP24530 442 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 EVCP57679 992 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 RPS6P62753 249 aaKnown RBP10.17□□□□□ -0.78
ITGB1-217ENST00000494395 FUT2Q10981 343 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 POTEBQ6S5H4 581 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 TMTC3Q6ZXV5 915 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 MICU3Q86XE3 530 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 RAB11FIP4Q86YS3 637 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms