RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 RSPH9Q9H1X1 276 aaPredicted RBP7.58□□□□□ -1.2
FNDC3B-212ENST00000494000 GPCPD1Q9NPB8 672 aa7.58□□□□□ -1.2
FNDC3B-212ENST00000494000 PCDH12Q9NPG4 1184 aa7.58□□□□□ -1.2
FNDC3B-212ENST00000494000 RIC8AQ9NPQ8 531 aa7.58□□□□□ -1.2
FNDC3B-212ENST00000494000 DACT1Q9NYF0 836 aa7.58□□□□□ -1.2
FNDC3B-212ENST00000494000 RNF181Q9P0P0 153 aa7.58□□□□□ -1.2
FNDC3B-212ENST00000494000 WDR46O15213 610 aaKnown RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 NRDCO43847 1150 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 ECEL1O95672 775 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 LDHAP00338 332 aaKnown RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 FOSP01100 380 aaPredicted RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 FECHP22830 423 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 PRPHP41219 470 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 TOB1P50616 345 aaPredicted RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 STAT2P52630 851 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 NR5A1Q13285 461 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 TBC1D10BQ4KMP7 808 aaPredicted RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 RESP18Q5W5W9 173 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 USP50Q70EL3 339 aaPredicted RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 SIAH1Q8IUQ4 282 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 REXO1Q8N1G1 1221 aaKnown RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 ENGASEQ8NFI3 743 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 L3MBTL3Q96JM7 780 aaPredicted RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 WDR18Q9BV38 432 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 AMNQ9BXJ7 453 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 FRMPD2Q68DX3 1309 aaPredicted RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 PHF20L1A8MW92 1017 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 GCFC2P16383 781 aaKnown RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 ATP2C1P98194 919 aaPredicted RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 AP3B2Q13367 1082 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 LRRC41Q15345 812 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 NOL9Q5SY16 702 aaKnown RBP7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 BANK1Q8NDB2 785 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 OXER1Q8TDS5 423 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 NELL1Q92832 810 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 KIAA1683Q9H0B3 1180 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 GRPEL1Q9HAV7 217 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 PCDHA6Q9UN73 950 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 PCDHA8Q9Y5H6 950 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 DOCK1Q14185 1865 aa7.57□□□□□ -1.2
FNDC3B-212ENST00000494000 SYCE3A1L190 88 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 FAM196BA6NMK8 535 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 C19orf81C9J6K1 198 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 UBE2Q2LH0YL09 131 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 SLC26A4O43511 780 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 COPB2P35606 906 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 LONP1P36776 959 aaKnown RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 SLC35G1Q2M3R5 365 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 ZCCHC8Q6NZY4 707 aaKnown RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 SASS6Q6UVJ0 657 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 PIK3AP1Q6ZUJ8 805 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 RPAINQ86UA6 219 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 FBXO11Q86XK2 927 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 HOMER1Q86YM7 354 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 WDR75Q8IWA0 830 aaKnown RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 SCYL3Q8IZE3 742 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 FMR1NBQ8N0W7 255 aaPredicted RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 GPKOWQ92917 476 aaPredicted RBP eCLIP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 CCDC102AQ96A19 550 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 DCPSQ96C86 337 aaKnown RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 EHMT1Q9H9B1 1298 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 VAT1LQ9HCJ6 419 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 IP6K2Q9UHH9 426 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 HPSEQ9Y251 543 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 hCG_1642624A0A1W2PR95 340 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 IQCA1LA6NCM1 817 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 FAM200BP0CF97 657 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 TXLNAP40222 546 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 SYKP43405 635 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 IKQ13123 557 aaPredicted RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 ZRSR1Q15695 479 aaKnown RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 E2F4Q16254 413 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 CDC37Q16543 378 aaPredicted RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 MOXD1Q6UVY6 613 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 KCTD1Q719H9 257 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 FILIP1Q7Z7B0 1213 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 NEK8Q86SG6 692 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 AK8Q96MA6 479 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 FAM161BQ96MY7 647 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 IER2Q9BTL4 223 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 SPC25Q9HBM1 224 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 PICK1Q9NRD5 415 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 FBXO2Q9UK22 296 aaPredicted RBP7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 PCDHB6Q9Y5E3 794 aa7.56□□□□□ -1.2
FNDC3B-212ENST00000494000 SCN4AP35499 1836 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 TMEM232C9JQI7 657 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 GPR37O15354 613 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 NR1I2O75469 434 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 NF2P35240 595 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 LDLRAD1Q5T700 205 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 UHMK1Q8TAS1 419 aaKnown RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 SHISA4Q96DD7 197 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 FEZ1Q99689 392 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 SDF4Q9BRK5 362 aa7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 FAM126AQ9BYI3 521 aaPredicted RBP7.55□□□□□ -1.2
FNDC3B-212ENST00000494000 FTOQ9C0B1 505 aaKnown RBP eCLIP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms