RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 PXMP2Q9NR77 195 aa18.67■□□□□ 0.58
SATB1-217ENST00000493952 MAP3K20Q9NYL2 800 aaKnown RBP18.67■□□□□ 0.58
SATB1-217ENST00000493952 GNEQ9Y223 722 aaKnown RBP18.67■□□□□ 0.58
SATB1-217ENST00000493952 RBM47A0AV96 593 aaKnown RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 B4DLN1 442 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 GCOM1H8Y6P7 765 aaPredicted RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 CTAGE5O15320 804 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 POLR2MP0CAP2 368 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 EIF2AK2P19525 551 aaKnown RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 CST5P28325 142 aaPredicted RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 MRPL12P52815 198 aaKnown RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 ATN1P54259 1190 aaPredicted RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 FUT2Q10981 343 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 ARHGEF16Q5VV41 709 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 CCSAPQ6IQ19 270 aaPredicted RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 NOL8Q76FK4 1167 aaKnown RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 C7orf61Q8IZ16 206 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 SAMD3Q8N6K7 520 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 UPF3BQ9BZI7 483 aaKnown RBP18.66■□□□□ 0.58
SATB1-217ENST00000493952 CYP46A1Q9Y6A2 500 aa18.66■□□□□ 0.58
SATB1-217ENST00000493952 SEC24BO95487 1268 aa18.65■□□□□ 0.58
SATB1-217ENST00000493952 METAP2P50579 478 aaKnown RBP eCLIP18.65■□□□□ 0.58
SATB1-217ENST00000493952 TOB2Q14106 344 aaPredicted RBP18.65■□□□□ 0.58
SATB1-217ENST00000493952 TLK2Q86UE8 772 aa18.65■□□□□ 0.58
SATB1-217ENST00000493952 IWS1Q96ST2 819 aa18.65■□□□□ 0.58
SATB1-217ENST00000493952 WDR11Q9BZH6 1224 aa18.65■□□□□ 0.58
SATB1-217ENST00000493952 SPC25Q9HBM1 224 aa18.65■□□□□ 0.58
SATB1-217ENST00000493952 NR2E3Q9Y5X4 410 aa18.65■□□□□ 0.58
SATB1-217ENST00000493952 A0A1W2PQ45 241 aaPredicted RBP18.64■□□□□ 0.57
SATB1-217ENST00000493952 A0A1W2PQY0 241 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 ACLYP53396 1101 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 NKX3-2P78367 333 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 BEX3Q00994 111 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 KCNA10Q16322 511 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 DUSP28Q4G0W2 176 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 SLC39A5Q6ZMH5 540 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 FCHSD1Q86WN1 690 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 GPKOWQ92917 476 aaPredicted RBP eCLIP18.64■□□□□ 0.57
SATB1-217ENST00000493952 PDCD2LQ9BRP1 358 aa18.64■□□□□ 0.57
SATB1-217ENST00000493952 TSEN34Q9BSV6 310 aaKnown RBP18.64■□□□□ 0.57
SATB1-217ENST00000493952 MOXD2PA6NHM9 499 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 NR3C2P08235 984 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
SATB1-217ENST00000493952 EVCP57679 992 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 SNX17Q15036 470 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 PGM5Q15124 567 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 STXBP2Q15833 593 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 HEATR3Q7Z4Q2 680 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 IL31RAQ8NI17 732 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 SCFD2Q8WU76 684 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 AP5M1Q9H0R1 490 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 Q9Y3F1 56 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 DNAH12Q6ZR08 3092 aa18.63■□□□□ 0.57
SATB1-217ENST00000493952 SCN10AQ9Y5Y9 1956 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 DYNC1LI2O43237 492 aaPredicted RBP18.62■□□□□ 0.57
SATB1-217ENST00000493952 ARIH2O95376 493 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 ASGR1P07306 291 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 MYCLP12524 364 aaPredicted RBP18.62■□□□□ 0.57
SATB1-217ENST00000493952 RTP1P59025 263 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 ANAPC15P60006 121 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 PPP2R5BQ15173 497 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 GNASQ5JWF2 1037 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 WWC2Q6AWC2 1192 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 USP17L6PQ6QN14 398 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 SEPT14Q6ZU15 432 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 PCSK9Q8NBP7 692 aaKnown RBP18.62■□□□□ 0.57
SATB1-217ENST00000493952 V9GY48 417 aaPredicted RBP18.62■□□□□ 0.57
SATB1-217ENST00000493952 FRMPD4Q14CM0 1322 aa18.62■□□□□ 0.57
SATB1-217ENST00000493952 CCDC196A0A1B0GTZ2 297 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 PIK3CDO00329 1044 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 MEIS2O14770 477 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 EIF5BO60841 1220 aaKnown RBP18.61■□□□□ 0.57
SATB1-217ENST00000493952 PDIA3P30101 505 aaKnown RBP18.61■□□□□ 0.57
SATB1-217ENST00000493952 TTLL4Q14679 1199 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 FSCN1Q16658 493 aaKnown RBP18.61■□□□□ 0.57
SATB1-217ENST00000493952 TRIM60Q495X7 471 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 C8orf34Q49A92 452 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 SMARCC2Q8TAQ2 1214 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 COPS5Q92905 334 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 LARP6Q9BRS8 491 aaKnown RBP18.61■□□□□ 0.57
SATB1-217ENST00000493952 PDRG1Q9NUG6 133 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 ZMYND8Q9ULU4 1186 aaPredicted RBP18.61■□□□□ 0.57
SATB1-217ENST00000493952 ATP11BQ9Y2G3 1177 aa18.61■□□□□ 0.57
SATB1-217ENST00000493952 EIF3JO75822 258 aaKnown RBP18.6■□□□□ 0.57
SATB1-217ENST00000493952 TXNP10599 105 aaKnown RBP18.6■□□□□ 0.57
SATB1-217ENST00000493952 SYN1P17600 705 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 CCT2P78371 535 aaKnown RBP18.6■□□□□ 0.57
SATB1-217ENST00000493952 NTRK3Q16288 839 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 C1orf53Q5VUE5 145 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 TYW1BQ6NUM6 668 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 CCDC62Q6P9F0 684 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 VSIG10LQ86VR7 867 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 OR6J1Q8NGC5 347 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 CUL5Q93034 780 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 IL17RAQ96F46 866 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 PSTPIP2Q9H939 334 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 STARD7Q9NQZ5 370 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
SATB1-217ENST00000493952 NKRFO15226 690 aaKnown RBP eCLIP18.59■□□□□ 0.57
SATB1-217ENST00000493952 RGS20O76081 388 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms