RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 TOB2Q14106 344 aaPredicted RBP18.29■□□□□ 0.52
PSMB4-205ENST00000493673 CPLX2Q6PUV4 134 aaKnown RBP18.29■□□□□ 0.52
PSMB4-205ENST00000493673 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
PSMB4-205ENST00000493673 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
PSMB4-205ENST00000493673 PDGFCQ9NRA1 345 aa18.29■□□□□ 0.52
PSMB4-205ENST00000493673 COL20A1Q9P218 1284 aa18.29■□□□□ 0.52
PSMB4-205ENST00000493673 DDX49Q9Y6V7 483 aaKnown RBP18.29■□□□□ 0.52
PSMB4-205ENST00000493673 hCG_1984214I3L0E3 225 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 CPLX1O14810 134 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 DYNC1LI2O43237 492 aaPredicted RBP18.28■□□□□ 0.52
PSMB4-205ENST00000493673 ZEB2O60315 1214 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 COL6A1P12109 1028 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 GJA9P57773 515 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 FUT2Q10981 343 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 GNASQ5JWF2 1037 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 ZNF713Q8N859 430 aaPredicted RBP18.28■□□□□ 0.52
PSMB4-205ENST00000493673 SCFD2Q8WU76 684 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 PLXNA1Q9UIW2 1896 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 RBM47A0AV96 593 aaKnown RBP18.28■□□□□ 0.52
PSMB4-205ENST00000493673 NKRFO15226 690 aaKnown RBP eCLIP18.28■□□□□ 0.52
PSMB4-205ENST00000493673 MYCLP12524 364 aaPredicted RBP18.28■□□□□ 0.52
PSMB4-205ENST00000493673 NAPAP54920 295 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 CCT2P78371 535 aaKnown RBP18.28■□□□□ 0.52
PSMB4-205ENST00000493673 TTLL4Q14679 1199 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 DUSP28Q4G0W2 176 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 TEX2Q8IWB9 1127 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 GLT8D2Q9H1C3 349 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 UPF2Q9HAU5 1272 aaKnown RBP18.28■□□□□ 0.52
PSMB4-205ENST00000493673 SYNRGQ9UMZ2 1314 aa18.28■□□□□ 0.52
PSMB4-205ENST00000493673 SMCHD1A6NHR9 2005 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.27■□□□□ 0.52
PSMB4-205ENST00000493673 PIK3CDO00329 1044 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 ADAMTS4O75173 837 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 SMPD1P17405 629 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 CCND2P30279 289 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 KCNA10Q16322 511 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 C8orf34Q49A92 452 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 BRDTQ58F21 947 aaPredicted RBP18.27■□□□□ 0.52
PSMB4-205ENST00000493673 KLHDC9Q8NEP7 349 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 LENG1Q96BZ8 264 aaPredicted RBP18.27■□□□□ 0.52
PSMB4-205ENST00000493673 PDCD2LQ9BRP1 358 aa18.27■□□□□ 0.52
PSMB4-205ENST00000493673 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.52
PSMB4-205ENST00000493673 CNTNAP5Q8WYK1 1306 aa18.27■□□□□ 0.51
PSMB4-205ENST00000493673 BAZ2BQ9UIF8 2168 aaKnown RBP18.26■□□□□ 0.51
PSMB4-205ENST00000493673 MOXD2PA6NHM9 499 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 PRPF3O43395 683 aaKnown RBP18.26■□□□□ 0.51
PSMB4-205ENST00000493673 TXNP10599 105 aaKnown RBP18.26■□□□□ 0.51
PSMB4-205ENST00000493673 PPP1R18Q6NYC8 613 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 USP17L6PQ6QN14 398 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 SEPT14Q6ZU15 432 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 VSIG10LQ86VR7 867 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 TRIM22Q8IYM9 498 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 FERMT2Q96AC1 680 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 VTI1AQ96AJ9 217 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 IL17RAQ96F46 866 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 PHF24Q9UPV7 400 aa18.26■□□□□ 0.51
PSMB4-205ENST00000493673 GNEQ9Y223 722 aaKnown RBP18.26■□□□□ 0.51
PSMB4-205ENST00000493673 IFNAR1P17181 557 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 NEK4P51957 841 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 CCDC12Q8WUD4 166 aaPredicted RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 GPKOWQ92917 476 aaPredicted RBP eCLIP18.25■□□□□ 0.512e-6■■■□□ 14.8
PSMB4-205ENST00000493673 LARP6Q9BRS8 491 aaKnown RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 EHMT1Q9H9B1 1298 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 BARHL2Q9NY43 387 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 SPDYE3A6NKU9 549 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 MEIS2O14770 477 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 SCG2P13521 617 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 CST5P28325 142 aaPredicted RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 ACLYP53396 1101 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 ATN1P54259 1190 aaPredicted RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 SSRP1Q08945 709 aaKnown RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 STK3Q13188 491 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 NID2Q14112 1375 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 PGM5Q15124 567 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 WWC2Q6AWC2 1192 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 XRRA1Q6P2D8 792 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 SLC39A5Q6ZMH5 540 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 SLC26A6Q9BXS9 759 aa18.25■□□□□ 0.51
PSMB4-205ENST00000493673 RNF26Q9BY78 433 aaPredicted RBP18.25■□□□□ 0.51
PSMB4-205ENST00000493673 SMCO2A6NFE2 343 aa18.24■□□□□ 0.51
PSMB4-205ENST00000493673 ADCY6O43306 1168 aa18.24■□□□□ 0.51
PSMB4-205ENST00000493673 STAM2O75886 525 aa18.24■□□□□ 0.51
PSMB4-205ENST00000493673 NKX3-2P78367 333 aa18.24■□□□□ 0.51
PSMB4-205ENST00000493673 FSCN1Q16658 493 aaKnown RBP18.24■□□□□ 0.51
PSMB4-205ENST00000493673 PRPF38BQ5VTL8 546 aaKnown RBP18.24■□□□□ 0.51
PSMB4-205ENST00000493673 GLT1D1Q96MS3 346 aa18.24■□□□□ 0.51
PSMB4-205ENST00000493673 NCOA5Q9HCD5 579 aaKnown RBP18.24■□□□□ 0.51
PSMB4-205ENST00000493673 RIC8AQ9NPQ8 531 aa18.24■□□□□ 0.51
PSMB4-205ENST00000493673 BRCA2P51587 3418 aa18.24■□□□□ 0.51
PSMB4-205ENST00000493673 CDKL5O76039 1030 aa18.23■□□□□ 0.51
PSMB4-205ENST00000493673 FOSP01100 380 aaPredicted RBP18.23■□□□□ 0.51
PSMB4-205ENST00000493673 ASGR1P07306 291 aa18.23■□□□□ 0.51
PSMB4-205ENST00000493673 CPT1AP50416 773 aa18.23■□□□□ 0.51
PSMB4-205ENST00000493673 ADCY7P51828 1080 aa18.23■□□□□ 0.51
PSMB4-205ENST00000493673 OR6J1Q8NGC5 347 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms