RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 RBM28Q9NW13 759 aaKnown RBP20.84■□□□□ 0.93
GTF3C2-212ENST00000493511 COL20A1Q9P218 1284 aa20.84■□□□□ 0.93
GTF3C2-212ENST00000493511 PRKAG2Q9UGJ0 569 aa20.84■□□□□ 0.93
GTF3C2-212ENST00000493511 COLQQ9Y215 455 aaPredicted RBP20.84■□□□□ 0.93
GTF3C2-212ENST00000493511 RBM47A0AV96 593 aaKnown RBP20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 MYADML2A6NDP7 307 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 GCOM1H8Y6P7 765 aaPredicted RBP20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 ZBTB43O43298 467 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 POLR2MP0CAP2 368 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 PPP2R5BQ15173 497 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 STXBP2Q15833 593 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 FSCN1Q16658 493 aaKnown RBP20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 TMTC3Q6ZXV5 915 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 RAB11FIP4Q86YS3 637 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 SRBD1Q8N5C6 995 aaKnown RBP20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 LAMA3Q16787 3333 aa20.83■□□□□ 0.93
GTF3C2-212ENST00000493511 ELP1O95163 1332 aa20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 NKRFO15226 690 aaKnown RBP eCLIP20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 DYNC1LI2O43237 492 aaPredicted RBP20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 ZEB2O60315 1214 aa20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 ASGR1P07306 291 aa20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 SYN1P17600 705 aa20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 RCAN1P53805 252 aa20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 PXMP2Q9NR77 195 aa20.82■□□□□ 0.92
GTF3C2-212ENST00000493511 KLF18A0A0U1RQI7 1052 aa20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 CTAGE5O15320 804 aa20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 EIF2AK2P19525 551 aaKnown RBP20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 HOXA13P31271 388 aaPredicted RBP20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 TTLL4Q14679 1199 aa20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 RTN1Q16799 776 aa20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 TRIM60Q495X7 471 aa20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 HABP4Q5JVS0 413 aaKnown RBP20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 CMTR1Q8N1G2 835 aaKnown RBP20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 BRPF3Q9ULD4 1205 aa20.81■□□□□ 0.92
GTF3C2-212ENST00000493511 EIF3JO75822 258 aaKnown RBP20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 CABYRO75952 493 aa20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 NR3C2P08235 984 aa20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 CASTP20810 708 aaKnown RBP20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 IRX5P78411 483 aaPredicted RBP20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 BEX3Q00994 111 aa20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 BRDTQ58F21 947 aaPredicted RBP20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 CCDC82Q8N4S0 544 aa20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 VTI1AQ96AJ9 217 aa20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 USP26Q9BXU7 913 aa20.8■□□□□ 0.92
GTF3C2-212ENST00000493511 LAMA2P24043 3122 aaKnown RBP20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 GOLGA8AA7E2F4 631 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 GOLGA8BA8MQT2 603 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 TXNP10599 105 aaKnown RBP20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 CPA1P15085 419 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 RPS6KB1P23443 525 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 CPT1AP50416 773 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 TLE2Q04725 743 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 Q6ZUG5 572 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 FBXL16Q8N461 479 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 CUL5Q93034 780 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 PRO3102Q9H379 93 aa20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 NAP1L2Q9ULW6 460 aaPredicted RBP20.79■□□□□ 0.92
GTF3C2-212ENST00000493511 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 A0A0U1RQG5 324 aaPredicted RBP20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 PQBP1O60828 265 aaKnown RBP20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 EIF5BO60841 1220 aaKnown RBP20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 MAGEA10P43363 369 aaPredicted RBP20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 TMEM63BQ5T3F8 832 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 SEPT14Q6ZU15 432 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 FCHSD1Q86WN1 690 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 OR6J1Q8NGC5 347 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 BRF1Q92994 677 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 TOX2Q96NM4 488 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 GDF15Q99988 308 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 LBHD1Q9BQE6 289 aaPredicted RBP20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 PDCD2LQ9BRP1 358 aa20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 RBM27Q9P2N5 1060 aaKnown RBP20.78■□□□□ 0.92
GTF3C2-212ENST00000493511 A0A1W2PPC1 479 aa20.77■□□□□ 0.92
GTF3C2-212ENST00000493511 DCDC2CA8MYV0 355 aa20.77■□□□□ 0.92
GTF3C2-212ENST00000493511 METAP2P50579 478 aaKnown RBP eCLIP20.77■□□□□ 0.92
GTF3C2-212ENST00000493511 CXCL17Q6UXB2 119 aa20.77■□□□□ 0.92
GTF3C2-212ENST00000493511 ANKRD33Q7Z3H0 272 aa20.77■□□□□ 0.92
GTF3C2-212ENST00000493511 SMARCC2Q8TAQ2 1214 aa20.77■□□□□ 0.92
GTF3C2-212ENST00000493511 PRDM5Q9NQX1 630 aaPredicted RBP20.77■□□□□ 0.92
GTF3C2-212ENST00000493511 PIK3CDO00329 1044 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 CLTBP09497 229 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 MYCLP12524 364 aaPredicted RBP20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 PTGS1P23219 599 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 CCND2P30279 289 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 BMP8BP34820 402 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 APOBRQ0VD83 1088 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 PGM5Q15124 567 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 VSIG10LQ86VR7 867 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 SEZ6LQ9BYH1 1024 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 PSTPIP2Q9H939 334 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 PDLIM7Q9NR12 457 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 POLR3EQ9NVU0 708 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 CYP46A1Q9Y6A2 500 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 CNTNAP5Q8WYK1 1306 aa20.76■□□□□ 0.91
GTF3C2-212ENST00000493511 hCG_1642624A0A1W2PR95 340 aa20.75■□□□□ 0.91
GTF3C2-212ENST00000493511 ARVCFO00192 962 aa20.75■□□□□ 0.91
GTF3C2-212ENST00000493511 CCDC62Q6P9F0 684 aa20.75■□□□□ 0.91
GTF3C2-212ENST00000493511 KCNV1Q6PIU1 500 aa20.75■□□□□ 0.91
GTF3C2-212ENST00000493511 RUFY3Q7L099 469 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms