RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 DEFB118Q96PH6 123 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 IWS1Q96ST2 819 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 BRMS1Q9HCU9 246 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 BARHL2Q9NY43 387 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 FLRT1Q9NZU1 646 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
TM4SF1-204ENST00000493348 C19orf67A6NJJ6 358 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 SEPT4O43236 478 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 PPP1R11O60927 126 aaPredicted RBP9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 FOSP01100 380 aaPredicted RBP9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 GJB1P08034 283 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 HSD17B4P51659 736 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 SCRN1Q12765 414 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 TRIM32Q13049 653 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 ACVR2BQ13705 512 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 BRDTQ58F21 947 aaPredicted RBP9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 WWC2Q6AWC2 1192 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 MAMDC4Q6UXC1 1216 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 EEPD1Q7L9B9 569 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 TEX2Q8IWB9 1127 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 FAM184AQ8NB25 1140 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 ARRDC4Q8NCT1 418 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 SYTL5Q8TDW5 730 aaPredicted RBP9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 GTF3C6Q969F1 213 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 AP5M1Q9H0R1 490 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 VTA1Q9NP79 307 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 FAM217BQ9NTX9 383 aaPredicted RBP9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 DDX20Q9UHI6 824 aaKnown RBP9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 LCTP09848 1927 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 KIAA1217Q5T5P2 1943 aa9.33□□□□□ -0.92
TM4SF1-204ENST00000493348 SOWAHBA6NEL2 793 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 KBTBD13C9JR72 458 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 STXBP3O00186 592 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 SGPL1O95470 568 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 CYBAP13498 195 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 CCND3P30281 292 aaPredicted RBP9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 ZNF76P36508 570 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 HMGN5P82970 282 aaKnown RBP9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 GNL2Q13823 731 aaKnown RBP9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 TTLL4Q14679 1199 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 ME3Q16798 604 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 GNPTABQ3T906 1256 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 PRAMEF19Q5SWL8 479 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 MAP3K21Q5TCX8 1036 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 CCDC83Q8IWF9 413 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 FAM177A1Q8N128 213 aaPredicted RBP9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 NECAB1Q8N987 351 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 U2AF1L4Q8WU68 220 aaKnown RBP9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 TBC1D5Q92609 795 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 TAAR1Q96RJ0 339 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 RIC8AQ9NPQ8 531 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 SH3GLB2Q9NR46 395 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 PXMP2Q9NR77 195 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 ORC3Q9UBD5 711 aaPredicted RBP9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 MYH7BA7E2Y1 1941 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 CENPFP49454 3210 aa9.32□□□□□ -0.92
TM4SF1-204ENST00000493348 STK36Q9NRP7 1315 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 FRMPD3Q5JV73 1810 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 PIK3CDO00329 1044 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 ZEB2O60315 1214 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 EIF3JO75822 258 aaKnown RBP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 STAM2O75886 525 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 SNAI1O95863 264 aaPredicted RBP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 NR3C2P08235 984 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 GJA8P48165 433 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 TNFAIP2Q03169 654 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 AP3B2Q13367 1082 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 SAFBQ15424 915 aaKnown RBP eCLIP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 NTRK3Q16288 839 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 UBE2SQ16763 222 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 SLC35G1Q2M3R5 365 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 CCDC144BQ3MJ40 725 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 IQSEC1Q6DN90 963 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 GALNT17Q6IS24 598 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 XRRA1Q6P2D8 792 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 KCNV1Q6PIU1 500 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 USP17L6PQ6QN14 398 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 SEPT14Q6ZU15 432 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 RNF180Q86T96 592 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 NLRX1Q86UT6 975 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 FBXO16Q8IX29 292 aaPredicted RBP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 REXO1Q8N1G1 1221 aaKnown RBP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 SCFD2Q8WU76 684 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 LLPHQ9BRT6 129 aaKnown RBP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 XPNPEP3Q9NQH7 507 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 PAK6Q9NQU5 681 aaPredicted RBP9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 VPS54Q9P1Q0 977 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
TM4SF1-204ENST00000493348 ESYT2A0FGR8 921 aa9.3□□□□□ -0.92
TM4SF1-204ENST00000493348 NKRFO15226 690 aaKnown RBP eCLIP9.3□□□□□ -0.92
TM4SF1-204ENST00000493348 HSP90AA1P07900 732 aaKnown RBP9.3□□□□□ -0.92
TM4SF1-204ENST00000493348 TXNP10599 105 aaKnown RBP9.3□□□□□ -0.92
TM4SF1-204ENST00000493348 GHRHRQ02643 423 aa9.3□□□□□ -0.92
TM4SF1-204ENST00000493348 FUT2Q10981 343 aa9.3□□□□□ -0.92
TM4SF1-204ENST00000493348 PGM5Q15124 567 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms