RNA–Protein interactions for RNA: ENST00000493085.5

GPM6B-209, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-209ENST00000493085 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
GPM6B-209ENST00000493085 AP5M1Q9H0R1 490 aa12.08□□□□□ -0.48
GPM6B-209ENST00000493085 PXMP2Q9NR77 195 aa12.08□□□□□ -0.48
GPM6B-209ENST00000493085 ZMYND8Q9ULU4 1186 aaPredicted RBP12.08□□□□□ -0.48
GPM6B-209ENST00000493085 GNEQ9Y223 722 aaKnown RBP12.08□□□□□ -0.48
GPM6B-209ENST00000493085 KIAA1217Q5T5P2 1943 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 A0A1W2PQ45 241 aaPredicted RBP12.07□□□□□ -0.48
GPM6B-209ENST00000493085 A0A1W2PQY0 241 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 RBM47A0AV96 593 aaKnown RBP12.07□□□□□ -0.48
GPM6B-209ENST00000493085 CEP290O15078 2479 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 DYNC1LI2O43237 492 aaPredicted RBP12.07□□□□□ -0.48
GPM6B-209ENST00000493085 EIF2AK2P19525 551 aaKnown RBP12.07□□□□□ -0.48
GPM6B-209ENST00000493085 HOXA13P31271 388 aaPredicted RBP12.07□□□□□ -0.48
GPM6B-209ENST00000493085 ACLYP53396 1101 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 RCAN1P53805 252 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 STXBP2Q15833 593 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 DUSP28Q4G0W2 176 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 GNASQ5JWF2 1037 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 CCSAPQ6IQ19 270 aaPredicted RBP12.07□□□□□ -0.48
GPM6B-209ENST00000493085 SCFD2Q8WU76 684 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 BRF1Q92994 677 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 STARD7Q9NQZ5 370 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 ATP11BQ9Y2G3 1177 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 Q9Y3F1 56 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 CNTNAP5Q8WYK1 1306 aa12.07□□□□□ -0.48
GPM6B-209ENST00000493085 hCG_1642624A0A1W2PR95 340 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
GPM6B-209ENST00000493085 ZEB2O60315 1214 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 ASGR1P07306 291 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 NR3C2P08235 984 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 SYN1P17600 705 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 PTGS1P23219 599 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 METAP2P50579 478 aaKnown RBP eCLIP12.06□□□□□ -0.48
GPM6B-209ENST00000493085 NKX3-2P78367 333 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 BEX3Q00994 111 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 TTLL4Q14679 1199 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 SNX17Q15036 470 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 FSCN1Q16658 493 aaKnown RBP12.06□□□□□ -0.48
GPM6B-209ENST00000493085 TRIM60Q495X7 471 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 RUFY3Q7L099 469 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 FCHSD1Q86WN1 690 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 CUL5Q93034 780 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 GLT1D1Q96MS3 346 aa12.06□□□□□ -0.48
GPM6B-209ENST00000493085 CCDC196A0A1B0GTZ2 297 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 CTAGE5O15320 804 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 EIF5BO60841 1220 aaKnown RBP12.05□□□□□ -0.48
GPM6B-209ENST00000493085 MYCLP12524 364 aaPredicted RBP12.05□□□□□ -0.48
GPM6B-209ENST00000493085 CDC27P30260 824 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 C1orf53Q5VUE5 145 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 SEPT14Q6ZU15 432 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 FBXL16Q8N461 479 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 SMARCC2Q8TAQ2 1214 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 VTI1AQ96AJ9 217 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 PDCD2LQ9BRP1 358 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 AGXT2Q9BYV1 514 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 TM6SF1Q9BZW5 370 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 PRKAG2Q9UGJ0 569 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 CYP46A1Q9Y6A2 500 aa12.05□□□□□ -0.48
GPM6B-209ENST00000493085 EIF3JO75822 258 aaKnown RBP12.04□□□□□ -0.48
GPM6B-209ENST00000493085 TXNP10599 105 aaKnown RBP12.04□□□□□ -0.48
GPM6B-209ENST00000493085 CCND2P30279 289 aa12.04□□□□□ -0.48
GPM6B-209ENST00000493085 PGM5Q15124 567 aa12.04□□□□□ -0.48
GPM6B-209ENST00000493085 GPKOWQ92917 476 aaPredicted RBP eCLIP12.04□□□□□ -0.48
GPM6B-209ENST00000493085 FAM217BQ9NTX9 383 aaPredicted RBP12.04□□□□□ -0.48
GPM6B-209ENST00000493085 COLQQ9Y215 455 aaPredicted RBP12.04□□□□□ -0.48
GPM6B-209ENST00000493085 ELP1O95163 1332 aa12.04□□□□□ -0.48
GPM6B-209ENST00000493085 MYH7BA7E2Y1 1941 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 A0A0U1RQG5 324 aaPredicted RBP12.03□□□□□ -0.48
GPM6B-209ENST00000493085 PIK3CDO00329 1044 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 PQBP1O60828 265 aaKnown RBP12.03□□□□□ -0.48
GPM6B-209ENST00000493085 CABYRO75952 493 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 ARIH2O95376 493 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 ADD1P35611 737 aaKnown RBP12.03□□□□□ -0.48
GPM6B-209ENST00000493085 CPT1AP50416 773 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 TLE2Q04725 743 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 FUT2Q10981 343 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 BRDTQ58F21 947 aaPredicted RBP12.03□□□□□ -0.48
GPM6B-209ENST00000493085 CCDC62Q6P9F0 684 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 USP17L6PQ6QN14 398 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 CXCL17Q6UXB2 119 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 IL31RAQ8NI17 732 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 COPS5Q92905 334 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 UPF3BQ9BZI7 483 aaKnown RBP12.03□□□□□ -0.48
GPM6B-209ENST00000493085 PSTPIP2Q9H939 334 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 PRDM5Q9NQX1 630 aaPredicted RBP12.03□□□□□ -0.48
GPM6B-209ENST00000493085 MRVI1Q9Y6F6 885 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 V9GY48 417 aaPredicted RBP12.03□□□□□ -0.48
GPM6B-209ENST00000493085 NID2Q14112 1375 aa12.03□□□□□ -0.48
GPM6B-209ENST00000493085 MEIS2O14770 477 aa12.02□□□□□ -0.49
GPM6B-209ENST00000493085 GH1P01241 217 aa12.02□□□□□ -0.49
GPM6B-209ENST00000493085 MYL3P08590 195 aa12.02□□□□□ -0.49
GPM6B-209ENST00000493085 MAGEA10P43363 369 aaPredicted RBP12.02□□□□□ -0.49
GPM6B-209ENST00000493085 NAPAP54920 295 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms