RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
CCM2-217ENST00000492883 OGDHLQ9ULD0 1010 aa16.07■□□□□ 0.16
CCM2-217ENST00000492883 DOCK3Q8IZD9 2030 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 STXBP3O00186 592 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 PIK3CDO00329 1044 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 MEIS2O14770 477 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 ST18O60284 1047 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 DEXIO95424 95 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 MYCNP04198 464 aaPredicted RBP16.06■□□□□ 0.16
CCM2-217ENST00000492883 MYCLP12524 364 aaPredicted RBP16.06■□□□□ 0.16
CCM2-217ENST00000492883 EDNRBP24530 442 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 STXBP2Q15833 593 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 PKN1Q16512 942 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 CCDC144BQ3MJ40 725 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 PPP1R18Q6NYC8 613 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 FBXO16Q8IX29 292 aaPredicted RBP16.06■□□□□ 0.16
CCM2-217ENST00000492883 CCDC12Q8WUD4 166 aaPredicted RBP16.06■□□□□ 0.16
CCM2-217ENST00000492883 SHISA4Q96DD7 197 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 KATNBL1Q9H079 304 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 VTA1Q9NP79 307 aa16.06■□□□□ 0.16
CCM2-217ENST00000492883 LARGE1O95461 756 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 NR3C2P08235 984 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 ADCYAP1R1P41586 468 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 ADCY7P51828 1080 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 TNFAIP2Q03169 654 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 IQSEC1Q6DN90 963 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 TYW1BQ6NUM6 668 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 IL27Q8NEV9 243 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 GTF3C6Q969F1 213 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
CCM2-217ENST00000492883 PDCD2LQ9BRP1 358 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 GLT8D2Q9H1C3 349 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 RIC8AQ9NPQ8 531 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 PDGFCQ9NRA1 345 aa16.05■□□□□ 0.16
CCM2-217ENST00000492883 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
CCM2-217ENST00000492883 EIF3JO75822 258 aaKnown RBP16.04■□□□□ 0.16
CCM2-217ENST00000492883 UBE2SQ16763 222 aa16.04■□□□□ 0.16
CCM2-217ENST00000492883 TAPT1Q6NXT6 567 aa16.04■□□□□ 0.16
CCM2-217ENST00000492883 SEPT14Q6ZU15 432 aa16.04■□□□□ 0.16
CCM2-217ENST00000492883 ARRDC4Q8NCT1 418 aa16.04■□□□□ 0.16
CCM2-217ENST00000492883 C6orf50Q9HD87 102 aa16.04■□□□□ 0.16
CCM2-217ENST00000492883 XPNPEP3Q9NQH7 507 aa16.04■□□□□ 0.16
CCM2-217ENST00000492883 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.03■□□□□ 0.16
CCM2-217ENST00000492883 DUSP11O75319 330 aaKnown RBP16.03■□□□□ 0.16
CCM2-217ENST00000492883 FARP2O94887 1054 aaPredicted RBP16.03■□□□□ 0.16
CCM2-217ENST00000492883 GNA11P29992 359 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 CCND2P30279 289 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 RGS19P49795 217 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 NLRP5P59047 1200 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 PGM5Q15124 567 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 VSIG10LQ86VR7 867 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 TEX2Q8IWB9 1127 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 CCDC148Q8NFR7 591 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 LENG1Q96BZ8 264 aaPredicted RBP16.03■□□□□ 0.16
CCM2-217ENST00000492883 WDR11Q9BZH6 1224 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 SPC25Q9HBM1 224 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 SH2B1Q9NRF2 756 aaPredicted RBP16.03■□□□□ 0.16
CCM2-217ENST00000492883 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 ORC3Q9UBD5 711 aaPredicted RBP16.03■□□□□ 0.16
CCM2-217ENST00000492883 PCDHA6Q9UN73 950 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 PCDHA8Q9Y5H6 950 aa16.03■□□□□ 0.16
CCM2-217ENST00000492883 ESYT2A0FGR8 921 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 DTNBO60941 627 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 CTDNEP1O95476 244 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 PGK1P00558 417 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 SMPD1P17405 629 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 GJC2Q5T442 439 aaPredicted RBP16.02■□□□□ 0.16
CCM2-217ENST00000492883 RNF180Q86T96 592 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 CCDC83Q8IWF9 413 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 PAWRQ96IZ0 340 aaKnown RBP16.02■□□□□ 0.16
CCM2-217ENST00000492883 ZMYND12Q9H0C1 365 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 EHMT1Q9H9B1 1298 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.16
CCM2-217ENST00000492883 RBM47A0AV96 593 aaKnown RBP16.01■□□□□ 0.15
CCM2-217ENST00000492883 DYNC1LI2O43237 492 aaPredicted RBP16.01■□□□□ 0.15
CCM2-217ENST00000492883 FOSP01100 380 aaPredicted RBP16.01■□□□□ 0.15
CCM2-217ENST00000492883 XBP1P17861 261 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 NECAB2Q7Z6G3 386 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 IL31RAQ8NI17 732 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 BICD2Q8TD16 824 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 WASF1Q92558 559 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
CCM2-217ENST00000492883 AP5M1Q9H0R1 490 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 RTEL1Q9NZ71 1219 aa16.01■□□□□ 0.15
CCM2-217ENST00000492883 STK36Q9NRP7 1315 aa16■□□□□ 0.15
CCM2-217ENST00000492883 KBTBD13C9JR72 458 aa16■□□□□ 0.15
CCM2-217ENST00000492883 DNM1LO00429 736 aa16■□□□□ 0.15
CCM2-217ENST00000492883 ADCY6O43306 1168 aa16■□□□□ 0.15
CCM2-217ENST00000492883 C6orf222P0C671 652 aaPredicted RBP16■□□□□ 0.15
CCM2-217ENST00000492883 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
CCM2-217ENST00000492883 MCM2P49736 904 aa16■□□□□ 0.15
CCM2-217ENST00000492883 LRRC41Q15345 812 aa16■□□□□ 0.15
CCM2-217ENST00000492883 DUSP28Q4G0W2 176 aa16■□□□□ 0.15
CCM2-217ENST00000492883 TMEM63BQ5T3F8 832 aa16■□□□□ 0.15
CCM2-217ENST00000492883 JAKMIP3Q5VZ66 844 aa16■□□□□ 0.15
CCM2-217ENST00000492883 NSUN7Q8NE18 718 aaKnown RBP16■□□□□ 0.15
CCM2-217ENST00000492883 DIS3LQ8TF46 1054 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms