RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 TSPY3P0CV98 308 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 TSPY8P0CW00 308 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 SELPP16109 830 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 TDO2P48775 406 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 ZP2Q05996 745 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 TCTN1Q2MV58 587 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 FBXO22Q8NEZ5 403 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 COPS5Q92905 334 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 MRPL38Q96DV4 380 aaKnown RBP14.31□□□□□ -0.12
GPNMB-214ENST00000492858 PHOX2BQ99453 314 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 C17orf80Q9BSJ5 609 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 EPB41L4AQ9HCS5 686 aaPredicted RBP14.31□□□□□ -0.12
GPNMB-214ENST00000492858 PRR12Q9ULL5 1215 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 PLIN4Q96Q06 1357 aa14.31□□□□□ -0.12
GPNMB-214ENST00000492858 ABHD14A-ACY1A0A1B0GW23 586 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 NKRFO15226 690 aaKnown RBP eCLIP14.3□□□□□ -0.12
GPNMB-214ENST00000492858 NBNO60934 754 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 CXCL10P02778 98 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
GPNMB-214ENST00000492858 EP400NLQ6ZTU2 488 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 MFSD14AQ96MC6 490 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 CTAGE1Q96RT6 745 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 PRKAG3Q9UGI9 489 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 FAM50BQ9Y247 325 aa14.3□□□□□ -0.12
GPNMB-214ENST00000492858 LOC102724159A0A0B4J2E5 919 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 RBAK-RBAKDNI3L0D1 243 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 NFIBO00712 420 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 PARNO95453 639 aaKnown RBP14.29□□□□□ -0.12
GPNMB-214ENST00000492858 APPP05067 770 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 ICAM1P05362 532 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 TFAP4Q01664 338 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 PDE4DQ08499 809 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 PWP2Q15269 919 aaKnown RBP14.29□□□□□ -0.12
GPNMB-214ENST00000492858 RASGRP2Q7LDG7 609 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 SCFD2Q8WU76 684 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 DHX38Q92620 1227 aaKnown RBP14.29□□□□□ -0.12
GPNMB-214ENST00000492858 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 LCTP09848 1927 aa14.29□□□□□ -0.12
GPNMB-214ENST00000492858 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 EFCAB14O75071 495 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 RAB11FIP3O75154 756 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 CKBP12277 381 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 CALML3P27482 149 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 IKBKEQ14164 716 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 PTPROQ16827 1216 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 TIGD5Q53EQ6 642 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 ZNF318Q5VUA4 2279 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 RCSD1Q6JBY9 416 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 ADHFE1Q8IWW8 467 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 BANK1Q8NDB2 785 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 PABPC5Q96DU9 382 aaKnown RBP14.28□□□□□ -0.12
GPNMB-214ENST00000492858 UPF3BQ9BZI7 483 aaKnown RBP14.28□□□□□ -0.12
GPNMB-214ENST00000492858 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 MTMR7Q9Y216 660 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 INSL6Q9Y581 213 aa14.28□□□□□ -0.12
GPNMB-214ENST00000492858 GPAA1O43292 621 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 ST18O60284 1047 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 HMMRO75330 724 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 TXNP10599 105 aaKnown RBP14.27□□□□□ -0.13
GPNMB-214ENST00000492858 IRS1P35568 1242 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 PDE4BQ07343 736 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 RBL2Q08999 1139 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 EPC2Q52LR7 807 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 TCEAL5Q5H9L2 206 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 SESTD1Q86VW0 696 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 APPBP2Q92624 585 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 RANBP17Q9H2T7 1088 aaKnown RBP14.27□□□□□ -0.13
GPNMB-214ENST00000492858 MUTYHQ9UIF7 546 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 SIP14410 1827 aa14.27□□□□□ -0.13
GPNMB-214ENST00000492858 MYH7P12883 1935 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 ARIH2O95376 493 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 GNAT2P19087 354 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 CCDC96Q2M329 555 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
GPNMB-214ENST00000492858 PRSS33Q8NF86 280 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 AFG1LQ8WV93 481 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 MPHOSPH6Q99547 160 aaKnown RBP14.26□□□□□ -0.13
GPNMB-214ENST00000492858 CLDND1Q9NY35 253 aa14.26□□□□□ -0.13
GPNMB-214ENST00000492858 EDNRBP24530 442 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 SLC16A2P36021 539 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 PTPN5P54829 565 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 PPP4R3BQ5MIZ7 849 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 SIRT2Q8IXJ6 389 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 MYOCDQ8IZQ8 938 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 CLEC4DQ8WXI8 215 aa14.25□□□□□ -0.13
GPNMB-214ENST00000492858 MYO15AQ9UKN7 3530 aa14.24□□□□□ -0.13
GPNMB-214ENST00000492858 TRIP12Q14669 1992 aaPredicted RBP14.24□□□□□ -0.13
GPNMB-214ENST00000492858 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
GPNMB-214ENST00000492858 M0R2C6 588 aa14.24□□□□□ -0.13
GPNMB-214ENST00000492858 AMHP03971 560 aa14.24□□□□□ -0.13
GPNMB-214ENST00000492858 SLC3A2P08195 630 aaKnown RBP14.24□□□□□ -0.13
GPNMB-214ENST00000492858 MMP3P08254 477 aa14.24□□□□□ -0.13
GPNMB-214ENST00000492858 RPS6P62753 249 aaKnown RBP14.24□□□□□ -0.13
GPNMB-214ENST00000492858 HTRA4P83105 476 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms